RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 PTPRDP23468 1912 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 CAPN15O75808 1086 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 KRT3P12035 628 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 RFC1P35251 1148 aaPredicted RBP16.11■□□□□ 0.17
RDX-209ENST00000530131 RGS7P49802 495 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 MDH1BQ5I0G3 518 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 DCUN1D2Q6PH85 259 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 FAM183BPQ6ZVS7 135 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 NIPA2Q8N8Q9 360 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 ANKRD7Q92527 254 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 PIWIL1Q96J94 861 aaKnown RBP16.11■□□□□ 0.17
RDX-209ENST00000530131 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.11■□□□□ 0.17
RDX-209ENST00000530131 MIS12Q9H081 205 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 ST7Q9NRC1 585 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 METTL5Q9NRN9 209 aaKnown RBP16.11■□□□□ 0.17
RDX-209ENST00000530131 TMEM59LQ9UK28 342 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 DSEQ9UL01 958 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 NLRC5Q86WI3 1866 aa16.11■□□□□ 0.17
RDX-209ENST00000530131 PGRMC1O00264 195 aaKnown RBP16.1■□□□□ 0.17
RDX-209ENST00000530131 TYMPP19971 482 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 RFC2P35250 354 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 PLA2G4AP47712 749 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 PLCB3Q01970 1234 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 RNASELQ05823 741 aaKnown RBP16.1■□□□□ 0.17
RDX-209ENST00000530131 DAB2IPQ5VWQ8 1189 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 CNKSR3Q6P9H4 555 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 NPAS4Q8IUM7 802 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 MMGT1Q8N4V1 131 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 FNIP1Q8TF40 1166 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 RNPC3Q96LT9 517 aaKnown RBP16.1■□□□□ 0.17
RDX-209ENST00000530131 PKMYT1Q99640 499 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 B3GNT5Q9BYG0 378 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 EPC1Q9H2F5 836 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 NRDE2Q9H7Z3 1164 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 CYLDQ9NQC7 956 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 RBM12Q9NTZ6 932 aaKnown RBP16.1■□□□□ 0.17
RDX-209ENST00000530131 LRFN2Q9ULH4 789 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 PCDHB8Q9UN66 801 aa16.1■□□□□ 0.17
RDX-209ENST00000530131 MYBPHLA2RUH7 354 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 CLDN5O00501 218 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 HOXA2O43364 376 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 CAPN2P17655 700 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 PCSK1P29120 753 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 TAS2R40P59535 323 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 ZNF211Q13398 564 aaPredicted RBP16.09■□□□□ 0.17
RDX-209ENST00000530131 OLFML1Q6UWY5 402 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 ABI1Q8IZP0 508 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.09■□□□□ 0.17
RDX-209ENST00000530131 ACBD6Q9BR61 282 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 DUSP16Q9BY84 665 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 ANKZF1Q9H8Y5 726 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 TRIM43BA6NCK2 446 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 PIK3R2O00459 728 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 XPO1O14980 1071 aaKnown RBP16.09■□□□□ 0.17
RDX-209ENST00000530131 PAPSS1O43252 624 aaPredicted RBP16.09■□□□□ 0.17
RDX-209ENST00000530131 ITGB8P26012 769 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 RNASE9P60153 205 aaKnown RBP16.09■□□□□ 0.17
RDX-209ENST00000530131 PIGHQ14442 188 aaPredicted RBP16.09■□□□□ 0.17
RDX-209ENST00000530131 METTL23Q86XA0 190 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 GPR161Q8N6U8 529 aaKnown RBP16.09■□□□□ 0.17
RDX-209ENST00000530131 MYCBPAPQ8TBZ2 947 aa16.09■□□□□ 0.17
RDX-209ENST00000530131 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
RDX-209ENST00000530131 FAM193BQ96PV7 902 aaPredicted RBP16.09■□□□□ 0.17
RDX-209ENST00000530131 ARHGEF37A1IGU5 675 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 F8VP50 259 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 PSTPIP1O43586 416 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 PYGMP11217 842 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 NPR3P17342 541 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 OR1G1P47890 313 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 RWDD2BP57060 319 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 INTS6LQ5JSJ4 861 aaKnown RBP16.08■□□□□ 0.16
RDX-209ENST00000530131 FAM102AQ5T9C2 384 aaPredicted RBP16.08■□□□□ 0.16
RDX-209ENST00000530131 OVOS1Q6IE37 1185 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 OR6B2Q6IFH4 312 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 TRNP1Q6NT89 227 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 AADACL2Q6P093 401 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 FAM171BQ6P995 826 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.08■□□□□ 0.165e-7■■■■■ 39.4
RDX-209ENST00000530131 CLEC20AQ6ZU45 233 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 NECAB2Q7Z6G3 386 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 FAM35AQ86V20 835 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 EMC1Q8N766 993 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 OR10T2Q8NGX3 314 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.164e-6■■■□□ 17.7
RDX-209ENST00000530131 PCED1BQ96HM7 432 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 HSFY1Q96LI6 401 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 HCSTQ9UBK5 93 aa16.08■□□□□ 0.16
RDX-209ENST00000530131 PRG3Q9Y2Y8 225 aaPredicted RBP16.08■□□□□ 0.16
RDX-209ENST00000530131 KIAA0355O15063 1070 aa16.07■□□□□ 0.16
RDX-209ENST00000530131 BEST1O76090 585 aa16.07■□□□□ 0.16
RDX-209ENST00000530131 TCF4P15884 667 aa16.07■□□□□ 0.16
RDX-209ENST00000530131 ZDHHC17Q8IUH5 632 aa16.07■□□□□ 0.16
RDX-209ENST00000530131 ARFGAP1Q8N6T3 406 aa16.07■□□□□ 0.16
RDX-209ENST00000530131 MRPL9Q9BYD2 267 aaKnown RBP16.07■□□□□ 0.16
RDX-209ENST00000530131 KRT82Q9NSB4 513 aa16.07■□□□□ 0.16
RDX-209ENST00000530131 TMEM30AQ9NV96 361 aa16.07■□□□□ 0.16
RDX-209ENST00000530131 PATJQ8NI35 1801 aa16.07■□□□□ 0.16
RDX-209ENST00000530131 C2CD4BA6NLJ0 364 aa16.07■□□□□ 0.16
RDX-209ENST00000530131 NRP1O14786 923 aa16.07■□□□□ 0.16
RDX-209ENST00000530131 TIMP1P01033 207 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms