RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 UBE2Q2Q8WVN8 375 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 OVCA2Q8WZ82 227 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 BAP1Q92560 729 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 MYLPFQ96A32 169 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 PCED1BQ96HM7 432 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 VCPIP1Q96JH7 1222 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 RIPOR3Q96MK2 946 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 SLITRK1Q96PX8 696 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 ARID3AQ99856 593 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 NCAPGQ9BPX3 1015 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 VN1R3Q9BXE9 311 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 GPR88Q9GZN0 384 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 PRDM12Q9H4Q4 367 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 PIDD1Q9HB75 910 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 LRRC4Q9HBW1 653 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 CSNK1G1Q9HCP0 422 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 ABHD10Q9NUJ1 306 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 SEPT11Q9NVA2 429 aaKnown RBP8.39□□□□□ -1.07
SSBP3-211ENST00000528787 TSPAN16Q9UKR8 245 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 COG5Q9UP83 839 aa8.39□□□□□ -1.07
SSBP3-211ENST00000528787 ZFP37Q9Y6Q3 630 aaPredicted RBP8.39□□□□□ -1.07
SSBP3-211ENST00000528787 MYBPHLA2RUH7 354 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 F8W810 466 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 O00370 1275 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 CCP110O43303 1012 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 CLASP2O75122 1294 aaKnown RBP8.38□□□□□ -1.07
SSBP3-211ENST00000528787 ZMYND10O75800 440 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 AP1G2O75843 785 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 MICAL2O94851 1124 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 CALB1P05937 261 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 C8AP07357 584 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 HAPLN1P10915 354 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-211ENST00000528787 ACAT1P24752 427 aaKnown RBP8.38□□□□□ -1.07
SSBP3-211ENST00000528787 DDX6P26196 483 aaKnown RBP eCLIP8.38□□□□□ -1.07
SSBP3-211ENST00000528787 CDC25CP30307 473 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 CLCN1P35523 988 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 SCNN1AP37088 669 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 PLA2G4AP47712 749 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 NRIP1P48552 1158 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 PSMC1P62191 440 aaKnown RBP8.38□□□□□ -1.07
SSBP3-211ENST00000528787 KRT83P78385 493 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 ARID5AQ03989 594 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 TBX2Q13207 712 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-211ENST00000528787 GRIN2CQ14957 1233 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 GOLGA7BQ2TAP0 167 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 LILRA6Q6PI73 481 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 DENND5BQ6ZUT9 1274 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 TOGARAM2Q6ZUX3 1019 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 TAS1R1Q7RTX1 841 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 FAM35AQ86V20 835 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 PALB2Q86YC2 1186 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 NUP93Q8N1F7 819 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 OR10T2Q8NGX3 314 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 WHAMMQ8TF30 809 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 KCTD13Q8WZ19 329 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 IRGQQ8WZA9 623 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 PABPC5Q96DU9 382 aaKnown RBP8.38□□□□□ -1.07
SSBP3-211ENST00000528787 TRMT2BQ96GJ1 504 aaKnown RBP8.38□□□□□ -1.07
SSBP3-211ENST00000528787 SEPT5Q99719 369 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-211ENST00000528787 AGPAT1Q99943 283 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 SDCBP2Q9H190 292 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 MRPL47Q9HD33 250 aaKnown RBP8.38□□□□□ -1.07
SSBP3-211ENST00000528787 CRTAC1Q9NQ79 661 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 CNGB3Q9NQW8 809 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.38□□□□□ -1.071e-6■■■■■ 160
SSBP3-211ENST00000528787 MAN1C1Q9NR34 630 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 KRT82Q9NSB4 513 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 PAXBP1Q9Y5B6 917 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 INSL5Q9Y5Q6 135 aa8.38□□□□□ -1.07
SSBP3-211ENST00000528787 NCANO14594 1321 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 HIDE1A8MVS5 230 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 GLI1P08151 1106 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 PTPN2P17706 415 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 BDNFP23560 247 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 DNAJB1P25685 340 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 ADORA2BP29275 332 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 CDH5P33151 784 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-211ENST00000528787 MTHFRP42898 656 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 KLK7P49862 253 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 GOLGA8FQ08AF8 430 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 GOLGA8DPQ0D2H9 430 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 DUSP4Q13115 394 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 MAPK8IP2Q13387 824 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-211ENST00000528787 ARHGAP15Q53QZ3 475 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 EFHC1Q5JVL4 640 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 ATAT1Q5SQI0 421 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-211ENST00000528787 ACBD5Q5T8D3 534 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-211ENST00000528787 DPY19L2P1Q6NXN4 242 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 GJB7Q6PEY0 223 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 RNF19BQ6ZMZ0 732 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 SLC47A2Q86VL8 602 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 MON1AQ86VX9 555 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 OSTM1Q86WC4 334 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 ERICH1Q86X53 443 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 GLYCTKQ8IVS8 523 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 SCN4BQ8IWT1 228 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 FUKQ8N0W3 1084 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 SLC7A14Q8TBB6 771 aa8.37□□□□□ -1.07
SSBP3-211ENST00000528787 SLC22A17Q8WUG5 538 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms