RNA–Protein interactions for RNA: ENST00000528699.1

SIPA1-204, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-204ENST00000528699 ZNF516Q92618 1163 aa11.51□□□□□ -0.57
SIPA1-204ENST00000528699 USP13Q92995 863 aaPredicted RBP11.51□□□□□ -0.57
SIPA1-204ENST00000528699 MYLPFQ96A32 169 aa11.51□□□□□ -0.57
SIPA1-204ENST00000528699 FNBP1Q96RU3 617 aa11.51□□□□□ -0.57
SIPA1-204ENST00000528699 GTSE1Q9NYZ3 720 aa11.51□□□□□ -0.57
SIPA1-204ENST00000528699 CDH9Q9ULB4 789 aa11.51□□□□□ -0.57
SIPA1-204ENST00000528699 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
SIPA1-204ENST00000528699 MAGED2Q9UNF1 606 aaPredicted RBP11.51□□□□□ -0.57
SIPA1-204ENST00000528699 R3HCC1Q9Y3T6 440 aaKnown RBP11.51□□□□□ -0.57
SIPA1-204ENST00000528699 NME7Q9Y5B8 376 aa11.51□□□□□ -0.57
SIPA1-204ENST00000528699 MYH10P35580 1976 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 PDXKO00764 312 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 EXOC3O60645 756 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 KINO60870 393 aaKnown RBP11.5□□□□□ -0.57
SIPA1-204ENST00000528699 FAM163BP0C2L3 166 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 KPNA1P52294 538 aaPredicted RBP11.5□□□□□ -0.57
SIPA1-204ENST00000528699 CLDN10P78369 228 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 TNK2Q07912 1038 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 GAS6Q14393 721 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 ZNF268Q14587 947 aaPredicted RBP11.5□□□□□ -0.57
SIPA1-204ENST00000528699 MAPRE1Q15691 268 aaKnown RBP11.5□□□□□ -0.57
SIPA1-204ENST00000528699 NFIL3Q16649 462 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 TSSK4Q6SA08 328 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 VSTM1Q6UX27 236 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 MAB21L3Q8N8X9 362 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 SPATA20Q8TB22 786 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 MRPS31Q92665 395 aaKnown RBP11.5□□□□□ -0.57
SIPA1-204ENST00000528699 SPATA17Q96L03 361 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 CEP295NLQ96MC4 621 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 FAM83CQ9BQN1 747 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 MRPL45Q9BRJ2 306 aaKnown RBP11.5□□□□□ -0.57
SIPA1-204ENST00000528699 XYLT2Q9H1B5 865 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 KIF9Q9HAQ2 790 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 LMAN1LQ9HAT1 526 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 TDP1Q9NUW8 608 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 ZSCAN32Q9NX65 697 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 UXTQ9UBK9 157 aaPredicted RBP11.5□□□□□ -0.57
SIPA1-204ENST00000528699 TRAF3IP3Q9Y228 551 aa11.5□□□□□ -0.57
SIPA1-204ENST00000528699 LRRIQ3A6PVS8 624 aaPredicted RBP11.49□□□□□ -0.57
SIPA1-204ENST00000528699 PAPSS2O95340 614 aaPredicted RBP11.49□□□□□ -0.57
SIPA1-204ENST00000528699 CASP4P49662 377 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 CCR3P51677 355 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 MCCD1P59942 119 aaPredicted RBP11.49□□□□□ -0.57
SIPA1-204ENST00000528699 MYL6P60660 151 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 FAM160A1Q05DH4 1040 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 PNOCQ13519 176 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 CCINQ13939 588 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 LRRC32Q14392 662 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 ITPRIPL2Q3MIP1 535 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 WDR72Q3MJ13 1102 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 ZCWPW2Q504Y3 356 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 DGKKQ5KSL6 1271 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 TDRD10Q5VZ19 366 aaKnown RBP11.49□□□□□ -0.57
SIPA1-204ENST00000528699 SCN4BQ8IWT1 228 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 GUF1Q8N442 669 aaKnown RBP11.49□□□□□ -0.57
SIPA1-204ENST00000528699 TTC8Q8TAM2 541 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 MYCBPAPQ8TBZ2 947 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 PARD3BQ8TEW8 1205 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 CHFRQ96EP1 664 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 PCED1BQ96HM7 432 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 SLC22A12Q96S37 553 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 MMS19Q96T76 1030 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 FAM126AQ9BYI3 521 aaPredicted RBP11.49□□□□□ -0.57
SIPA1-204ENST00000528699 EPC1Q9H2F5 836 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 VRTNQ9H8Y1 702 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 HPS4Q9NQG7 708 aa11.49□□□□□ -0.57
SIPA1-204ENST00000528699 THG1LQ9NWX6 298 aaKnown RBP11.49□□□□□ -0.57
SIPA1-204ENST00000528699 MAGEC2Q9UBF1 373 aaPredicted RBP11.49□□□□□ -0.57
SIPA1-204ENST00000528699 OTOL1A6NHN0 477 aaPredicted RBP11.48□□□□□ -0.57
SIPA1-204ENST00000528699 NR3C1P04150 777 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 PDGFRBP09619 1106 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 BDNFP23560 247 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 ATICP31939 592 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 GNL1P36915 607 aaPredicted RBP11.48□□□□□ -0.57
SIPA1-204ENST00000528699 AP3M2P53677 418 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 USP46P62068 366 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 TNNC1P63316 161 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 CYP27A1Q02318 531 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 USP4Q13107 963 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 TRPC3Q13507 836 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 ZNF77Q15935 545 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 MDH1BQ5I0G3 518 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 C1orf220Q5T0J3 134 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 TRIM68Q6AZZ1 485 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 Q6ZS52 159 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 DENND5BQ6ZUT9 1274 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 SPEM1Q8N4L4 309 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 ATRIPQ8WXE1 791 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 RUBCNQ92622 972 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 C8orf48Q96LL4 319 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 TIGD1Q96MW7 591 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 SNX25Q9H3E2 840 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 DPEP3Q9H4B8 488 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 RBM12Q9NTZ6 932 aaKnown RBP11.48□□□□□ -0.57
SIPA1-204ENST00000528699 TMEM30AQ9NV96 361 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 GCNT4Q9P109 453 aa11.48□□□□□ -0.57
SIPA1-204ENST00000528699 HELZP42694 1942 aaKnown RBP11.48□□□□□ -0.57
SIPA1-204ENST00000528699 C2orf78A6NCI8 922 aa11.47□□□□□ -0.57
SIPA1-204ENST00000528699 TRIM66O15016 1216 aa11.47□□□□□ -0.57
SIPA1-204ENST00000528699 MAPK13O15264 365 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms