RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 USP46P62068 366 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 GRSF1Q12849 480 aaKnown RBP eCLIP16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 ZNF268Q14587 947 aaPredicted RBP16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 SURF1Q15526 300 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 FAM26FQ5R3K3 315 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 STXBP4Q6ZWJ1 553 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 DPH6Q7L8W6 267 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 IQUBQ8NA54 791 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 SPATA18Q8TC71 538 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 SCFD1Q8WVM8 642 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 ZNF516Q92618 1163 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 CCDC127Q96BQ5 260 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 KIF9Q9HAQ2 790 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 AGPAT3Q9NRZ7 376 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 GCNT4Q9P109 453 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 UXTQ9UBK9 157 aaPredicted RBP16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 CDH9Q9ULB4 789 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 WNT6Q9Y6F9 365 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 ANAPC1Q9H1A4 1944 aa16.62■□□□□ 0.25
CLNS1A-210ENST00000528364 TRAV19A0A0A6YYK7 116 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 PRR5-ARHGAP8B1AHC4 643 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 POLR2DO15514 142 aaKnown RBP16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 USP17L7P0C7H9 530 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 WARSP23381 471 aaKnown RBP16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 GJA4P35212 333 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 GRIK1P39086 918 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 MAGEA11P43364 429 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 ARHGAP8P85298 464 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 AMPD3Q01432 767 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 CYP27A1Q02318 531 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 LMNB2Q03252 620 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 FAM160A1Q05DH4 1040 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 MTF1Q14872 753 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 ZNF77Q15935 545 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 SNRNP35Q16560 246 aaKnown RBP16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 CEP68Q76N32 757 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 WDR5BQ86VZ2 330 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 WDR49Q8IV35 697 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 FAM160A2Q8N612 972 aaPredicted RBP16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 EZH1Q92800 747 aaPredicted RBP16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 FUBP3Q96I24 572 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 CUEDC2Q9H467 287 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 ECT2Q9H8V3 914 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 SLC39A2Q9NP94 309 aa16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 DUS2Q9NX74 493 aaKnown RBP16.61■□□□□ 0.25
CLNS1A-210ENST00000528364 TPRP12270 2363 aaKnown RBP16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 ANTXRLA6NF34 631 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 EIF3DO15371 548 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 RNF40O75150 1001 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 YEATS4O95619 227 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 CKMP06732 381 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 HDCP19113 662 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 TNNI1P19237 187 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 HOXA6P31267 233 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 CNR2P34972 360 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 GNL1P36915 607 aaPredicted RBP16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 AFMP43652 599 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 ZXDBP98169 803 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 CYP24A1Q07973 514 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 EHHADHQ08426 723 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 PDGFRLQ15198 375 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 MDH1BQ5I0G3 518 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 CNNM4Q6P4Q7 775 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 C4orf50Q6ZRC1 276 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 GRAMD1CQ8IYS0 662 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 SH3RF2Q8TEC5 729 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 OSCP1Q8WVF1 389 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 PCED1BQ96HM7 432 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 P2RY13Q9BPV8 354 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 KIAA1586Q9HCI6 787 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 SEMA4GQ9NTN9 838 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 CDV3Q9UKY7 258 aaKnown RBP16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 PCDHA7Q9UN72 937 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 GREB1Q4ZG55 1949 aa16.6■□□□□ 0.25
CLNS1A-210ENST00000528364 DNAH14Q0VDD8 3507 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 AXIN1O15169 862 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 GDF9O60383 454 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 CACNA2D1P54289 1103 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 MYL6P60660 151 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 CUL4BQ13620 913 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 PSMD6Q15008 389 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 CCDC6Q16204 474 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 EML3Q32P44 896 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 UNC13DQ70J99 1090 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 SPRYD3Q8NCJ5 442 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 OR6B3Q8NGW1 331 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 MYCBPAPQ8TBZ2 947 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 PLEKHO2Q8TD55 490 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 SPATA17Q96L03 361 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 CGRRF1Q99675 332 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 SNX25Q9H3E2 840 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 DPEP3Q9H4B8 488 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 TMEM30AQ9NV96 361 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 SLC8A2Q9UPR5 921 aa16.59■□□□□ 0.25
CLNS1A-210ENST00000528364 SPAG17Q6Q759 2223 aa16.58■□□□□ 0.25
CLNS1A-210ENST00000528364 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.58■□□□□ 0.24
CLNS1A-210ENST00000528364 F8VP50 259 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms