RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 RPS9P46781 194 aaKnown RBP10.25□□□□□ -0.77
CHD7-208ENST00000528280 VAMP7P51809 220 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 MYL6P60660 151 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 ADAM9Q13443 819 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 GRM2Q14416 872 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 PPP2R5DQ14738 602 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 UBXN2BQ14CS0 331 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 DDR2Q16832 855 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 EDRF1Q3B7T1 1238 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 ZC3H14Q6PJT7 736 aaKnown RBP10.25□□□□□ -0.77
CHD7-208ENST00000528280 MAMSTRQ6ZN01 415 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 TPRG1Q6ZUI0 275 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 SCN4BQ8IWT1 228 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 CMTM8Q8IZV2 173 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 BPIFB1Q8TDL5 484 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 KBTBD7Q8WVZ9 684 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 FAM3CQ92520 227 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 CLDN23Q96B33 292 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 FAXDC2Q96IV6 333 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 SLC46A2Q9BY10 475 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 IMPG2Q9BZV3 1241 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 KIF9Q9HAQ2 790 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 IL21Q9HBE4 155 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 LTB4R2Q9NPC1 389 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 TDP1Q9NUW8 608 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 DLL3Q9NYJ7 618 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 NXF1Q9UBU9 619 aaKnown RBP10.25□□□□□ -0.77
CHD7-208ENST00000528280 FBXO4Q9UKT5 387 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 MAGED2Q9UNF1 606 aaPredicted RBP10.25□□□□□ -0.77
CHD7-208ENST00000528280 ATP8B3O60423 1300 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 PTPRJQ12913 1337 aa10.25□□□□□ -0.77
CHD7-208ENST00000528280 SPTBN2O15020 2390 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 LRRIQ3A6PVS8 624 aaPredicted RBP10.24□□□□□ -0.77
CHD7-208ENST00000528280 CETN3O15182 167 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 LAMTOR5O43504 91 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 CLSTN1O94985 981 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 DCNP07585 359 aaKnown RBP10.24□□□□□ -0.77
CHD7-208ENST00000528280 NR2F2P24468 414 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 KPNA1P52294 538 aaPredicted RBP10.24□□□□□ -0.77
CHD7-208ENST00000528280 CYP27A1Q02318 531 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 FAM160A1Q05DH4 1040 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 ZNF268Q14587 947 aaPredicted RBP10.24□□□□□ -0.77
CHD7-208ENST00000528280 ZNF699Q32M78 642 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 ZNF528Q3MIS6 628 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 ZACNQ401N2 412 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 COBLL1Q53SF7 1204 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 CC2D1AQ6P1N0 951 aaPredicted RBP10.24□□□□□ -0.77
CHD7-208ENST00000528280 POTEHQ6S545 545 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 UNC93AQ86WB7 457 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 OSTM1Q86WC4 334 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 RALGPS2Q86X27 583 aaPredicted RBP10.24□□□□□ -0.77
CHD7-208ENST00000528280 KIAA2013Q8IYS2 634 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 FMR1NBQ8N0W7 255 aaPredicted RBP10.24□□□□□ -0.77
CHD7-208ENST00000528280 TTC39CQ8N584 583 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 C8orf48Q96LL4 319 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 TSG101Q99816 390 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 MKNK1Q9BUB5 465 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 ELOVL4Q9GZR5 314 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 XYLT2Q9H1B5 865 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 GDPD2Q9HCC8 539 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 HEBP1Q9NRV9 189 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 COMMD8Q9NX08 183 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 DLGAP2Q9P1A6 1054 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 CIZ1Q9ULV3 898 aaPredicted RBP10.24□□□□□ -0.77
CHD7-208ENST00000528280 OTOGLQ3ZCN5 2332 aa10.24□□□□□ -0.77
CHD7-208ENST00000528280 TRAV19A0A0A6YYK7 116 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 ATP2C2O75185 946 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 USP17L7P0C7H9 530 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 BDNFP23560 247 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 NRLP54845 237 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 MCCD1P59942 119 aaPredicted RBP10.23□□□□□ -0.77
CHD7-208ENST00000528280 NOP14P78316 857 aaKnown RBP10.23□□□□□ -0.77
CHD7-208ENST00000528280 STIM1Q13586 685 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 LRRC32Q14392 662 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 ST3GAL2Q16842 350 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 ITPRIPL2Q3MIP1 535 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 DGKKQ5KSL6 1271 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 ZNF658Q5TYW1 1059 aaPredicted RBP10.23□□□□□ -0.77
CHD7-208ENST00000528280 TDRD10Q5VZ19 366 aaKnown RBP10.23□□□□□ -0.77
CHD7-208ENST00000528280 SCARA3Q6AZY7 606 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 DENND5BQ6ZUT9 1274 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 SV2AQ7L0J3 742 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 FAM186BQ8IYM0 893 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 SYNPOQ8N3V7 929 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 KIAA1958Q8N8K9 716 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 MAB21L3Q8N8X9 362 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 B3GALNT2Q8NCR0 500 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 SMARCE1Q969G3 411 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 MYLPFQ96A32 169 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 PCED1BQ96HM7 432 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 MRPL45Q9BRJ2 306 aaKnown RBP10.23□□□□□ -0.77
CHD7-208ENST00000528280 FAM126AQ9BYI3 521 aaPredicted RBP10.23□□□□□ -0.77
CHD7-208ENST00000528280 FOXQ1Q9C009 403 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 GOLPH3LQ9H4A5 285 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 FAM124BQ9H5Z6 455 aaPredicted RBP10.23□□□□□ -0.77
CHD7-208ENST00000528280 CYP3A43Q9HB55 503 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 CRTAC1Q9NQ79 661 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 SPATA6Q9NWH7 488 aaPredicted RBP10.23□□□□□ -0.77
CHD7-208ENST00000528280 TRPM5Q9NZQ8 1165 aa10.23□□□□□ -0.77
CHD7-208ENST00000528280 MAPK8IP1Q9UQF2 711 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms