RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 CNTN3Q9P232 1028 aa15.34■□□□□ 0.05
CAPN1-214ENST00000528165 TMEM150BA6NC51 233 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 COPEO14579 308 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 BUD23O43709 281 aaKnown RBP15.33■□□□□ 0.04
CAPN1-214ENST00000528165 HARSP12081 509 aaKnown RBP15.33■□□□□ 0.04
CAPN1-214ENST00000528165 GNA15P30679 374 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 YWHABP31946 246 aaKnown RBP15.33■□□□□ 0.04
CAPN1-214ENST00000528165 QARSP47897 775 aaKnown RBP15.33■□□□□ 0.04
CAPN1-214ENST00000528165 TMPRSS15P98073 1019 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 SLC18A2Q05940 514 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 C1QBPQ07021 282 aaKnown RBP15.33■□□□□ 0.04
CAPN1-214ENST00000528165 FAAP100Q0VG06 881 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 ASPHQ12797 758 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 LRRC38Q5VT99 294 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 PDSS2Q86YH6 399 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 MAP4K3Q8IVH8 894 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 TRIM42Q8IWZ5 723 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 MXRA8Q9BRK3 442 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 CHMP2BQ9UQN3 213 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 A6NJR5 290 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 E7ESA3 106 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 ALDH18A1P54886 795 aaKnown RBP15.33■□□□□ 0.04
CAPN1-214ENST00000528165 PSMC5P62195 406 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 ZNF200P98182 395 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-214ENST00000528165 MAP3K10Q02779 954 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 USP4Q13107 963 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 TBCCQ15814 346 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 AAGABQ6PD74 315 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 DHDDSQ86SQ9 333 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 TMEM161BQ8NDZ6 487 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 SLC35B2Q8TB61 432 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 CERKQ8TCT0 537 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 C7orf26Q96N11 449 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 ACAP3Q96P50 834 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 ZDHHC7Q9NXF8 308 aa15.33■□□□□ 0.04
CAPN1-214ENST00000528165 G3BP2Q9UN86 482 aaKnown RBP15.33■□□□□ 0.04
CAPN1-214ENST00000528165 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 RBM5P52756 815 aaKnown RBP eCLIP15.32■□□□□ 0.04
CAPN1-214ENST00000528165 GDF10P55107 478 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 DYNLT1P63172 113 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 ATG16L1Q676U5 607 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 TMEM270Q6UE05 265 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 KYAT3Q6YP21 454 aaKnown RBP15.32■□□□□ 0.04
CAPN1-214ENST00000528165 ADGRG6Q86SQ4 1221 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 FAM172AQ8WUF8 416 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 RSAD2Q8WXG1 361 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 FBXL18Q96ME1 805 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 SRPK1Q96SB4 655 aaKnown RBP15.32■□□□□ 0.04
CAPN1-214ENST00000528165 C10orf88Q9H8K7 445 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 S100A14Q9HCY8 104 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 XPO7Q9UIA9 1087 aaKnown RBP15.32■□□□□ 0.04
CAPN1-214ENST00000528165 PCDHB4Q9Y5E5 795 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 ARHGAP42A6NI28 874 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 F8VP50 259 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 GH2P01242 217 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 VAV1P15498 845 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 TSHRP16473 764 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 PTPN7P35236 360 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 CDKN2BP42772 138 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 DMP1Q13316 513 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-214ENST00000528165 HIC1Q14526 733 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 PPP1R2P3Q6NXS1 205 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 PTF1AQ7RTS3 328 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 KLHL23Q8NBE8 558 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 GSTCDQ8NEC7 633 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 SLC44A1Q8WWI5 657 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 RILPQ96NA2 401 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 KCNH7Q9NS40 1196 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 SAE1Q9UBE0 346 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-214ENST00000528165 CCNL1Q9UK58 526 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-214ENST00000528165 AGTPBP1Q9UPW5 1226 aa15.32■□□□□ 0.04
CAPN1-214ENST00000528165 SMIM31A0A1B0GVY4 71 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 TMEM191CA6NGB0 347 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 TMEM191BP0C7N4 346 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 SPATA31D3P0C874 917 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 KITP10721 976 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 UQCRBP14927 111 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 ITGB5P18084 799 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 STIP1P31948 543 aaKnown RBP15.31■□□□□ 0.04
CAPN1-214ENST00000528165 CCNFP41002 786 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 AQP5P55064 265 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 BST1Q10588 318 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 KBTBD12Q3ZCT8 623 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.31■□□□□ 0.04
CAPN1-214ENST00000528165 TRAPPC3LQ5T215 181 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 LMBRD2Q68DH5 695 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-214ENST00000528165 TXNRD3NBQ6F5E7 133 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 SPATA31D4Q6ZUB0 917 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 GPD1LQ8N335 351 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 PYDC1Q8WXC3 89 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 FAM213AQ9BRX8 229 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 MECRQ9BV79 373 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 C1orf21Q9H246 121 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 PREBQ9HCU5 417 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 GALNT8Q9NY28 637 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 DDX56Q9NY93 547 aaKnown RBP15.31■□□□□ 0.04
CAPN1-214ENST00000528165 MARCOQ9UEW3 520 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-214ENST00000528165 ZNRF3Q9ULT6 936 aa15.31■□□□□ 0.04
CAPN1-214ENST00000528165 MRPL11Q9Y3B7 192 aaKnown RBP15.31■□□□□ 0.04
CAPN1-214ENST00000528165 TMEM63AO94886 807 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms