RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 ZNF516Q92618 1163 aa24.7■■□□□ 1.54
PKP3-206ENST00000528036 C8orf48Q96LL4 319 aa24.7■■□□□ 1.54
PKP3-206ENST00000528036 CRTAC1Q9NQ79 661 aa24.7■■□□□ 1.54
PKP3-206ENST00000528036 PRMT8Q9NR22 394 aaPredicted RBP24.7■■□□□ 1.54
PKP3-206ENST00000528036 MIA3Q5JRA6 1907 aa24.7■■□□□ 1.54
PKP3-206ENST00000528036 ATP8B3O60423 1300 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 RIF1Q5UIP0 2472 aaKnown RBP24.69■■□□□ 1.54
PKP3-206ENST00000528036 SPECC1L-ADORA2AF8WAN1 911 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 TRIM21P19474 475 aaKnown RBP24.69■■□□□ 1.54
PKP3-206ENST00000528036 CTHP32929 405 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 GPR15P49685 360 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 MYL6P60660 151 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 PDGFRLQ15198 375 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 SGSM1Q2NKQ1 1148 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 ZNF667Q5HYK9 610 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 TXNDC8Q6A555 127 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 KRBA2Q6ZNG9 492 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 DENND5BQ6ZUT9 1274 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 ADSSL1Q8N142 457 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 TNIP3Q96KP6 325 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 LRRC3BQ96PB8 259 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 ELOVL4Q9GZR5 314 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 XYLT2Q9H1B5 865 aa24.69■■□□□ 1.54
PKP3-206ENST00000528036 NXF1Q9UBU9 619 aaKnown RBP24.69■■□□□ 1.54
PKP3-206ENST00000528036 A8MXQ7 604 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 ATP2C2O75185 946 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 C4BPAP04003 597 aaKnown RBP24.68■■□□□ 1.54
PKP3-206ENST00000528036 CHRNB1P11230 501 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 PTPN1P18031 435 aaKnown RBP24.68■■□□□ 1.54
PKP3-206ENST00000528036 BDNFP23560 247 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 CDR1P51861 262 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 PSMC1P62191 440 aaKnown RBP24.68■■□□□ 1.54
PKP3-206ENST00000528036 NUCB2P80303 420 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 FAM160A1Q05DH4 1040 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 MTAPQ13126 283 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 NCOA4Q13772 614 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 ZNF699Q32M78 642 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 KIAA1958Q8N8K9 716 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 NELL1Q92832 810 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 USP13Q92995 863 aaPredicted RBP24.68■■□□□ 1.54
PKP3-206ENST00000528036 PCED1BQ96HM7 432 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 FAM83CQ9BQN1 747 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 MRPL45Q9BRJ2 306 aaKnown RBP24.68■■□□□ 1.54
PKP3-206ENST00000528036 GTPBP4Q9BZE4 634 aaKnown RBP24.68■■□□□ 1.54
PKP3-206ENST00000528036 GZF1Q9H116 711 aaPredicted RBP24.68■■□□□ 1.54
PKP3-206ENST00000528036 GKN1Q9NS71 199 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 TRPM5Q9NZQ8 1165 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 R4GN57 208 aa24.68■■□□□ 1.54
PKP3-206ENST00000528036 LRRIQ3A6PVS8 624 aaPredicted RBP24.67■■□□□ 1.54
PKP3-206ENST00000528036 ZNF202O95125 648 aa24.67■■□□□ 1.54
PKP3-206ENST00000528036 NOP14P78316 857 aaKnown RBP24.67■■□□□ 1.54
PKP3-206ENST00000528036 DPYDQ12882 1025 aa24.67■■□□□ 1.54
PKP3-206ENST00000528036 MDH1BQ5I0G3 518 aa24.67■■□□□ 1.54
PKP3-206ENST00000528036 SDHAF4Q5VUM1 108 aa24.67■■□□□ 1.54
PKP3-206ENST00000528036 GUF1Q8N442 669 aaKnown RBP24.67■■□□□ 1.54
PKP3-206ENST00000528036 SPEM1Q8N4L4 309 aa24.67■■□□□ 1.54
PKP3-206ENST00000528036 ZBTB44Q8NCP5 570 aa24.67■■□□□ 1.54
PKP3-206ENST00000528036 B3GALNT2Q8NCR0 500 aa24.67■■□□□ 1.54
PKP3-206ENST00000528036 DNAI2Q9GZS0 605 aa24.67■■□□□ 1.54
PKP3-206ENST00000528036 CACNA1IQ9P0X4 2223 aa24.67■■□□□ 1.54
PKP3-206ENST00000528036 FAM186AA6NE01 2351 aa24.67■■□□□ 1.54
PKP3-206ENST00000528036 NUP210Q8TEM1 1887 aaPredicted RBP24.66■■□□□ 1.54
PKP3-206ENST00000528036 GOLGA6L4A6NEF3 574 aa24.66■■□□□ 1.54
PKP3-206ENST00000528036 TCF3P15923 654 aa24.66■■□□□ 1.54
PKP3-206ENST00000528036 RUNX3Q13761 415 aa24.66■■□□□ 1.54
PKP3-206ENST00000528036 ZACNQ401N2 412 aa24.66■■□□□ 1.54
PKP3-206ENST00000528036 TDRD10Q5VZ19 366 aaKnown RBP24.66■■□□□ 1.54
PKP3-206ENST00000528036 INTS8Q75QN2 995 aaKnown RBP24.66■■□□□ 1.54
PKP3-206ENST00000528036 GPIHBP1Q8IV16 184 aa24.66■■□□□ 1.54
PKP3-206ENST00000528036 TTLL2Q9BWV7 592 aa24.66■■□□□ 1.54
PKP3-206ENST00000528036 GTSE1Q9NYZ3 720 aa24.66■■□□□ 1.54
PKP3-206ENST00000528036 HCRTO43612 131 aa24.65■■□□□ 1.54
PKP3-206ENST00000528036 CLSTN1O94985 981 aa24.65■■□□□ 1.54
PKP3-206ENST00000528036 CKMP06732 381 aa24.65■■□□□ 1.54
PKP3-206ENST00000528036 CXCL12P48061 93 aa24.65■■□□□ 1.54
PKP3-206ENST00000528036 CASP4P49662 377 aa24.65■■□□□ 1.54
PKP3-206ENST00000528036 CEP135Q66GS9 1140 aa24.65■■□□□ 1.54
PKP3-206ENST00000528036 ZFYVE19Q96K21 471 aa24.65■■□□□ 1.54
PKP3-206ENST00000528036 RMND1Q9NWS8 449 aa24.65■■□□□ 1.54
PKP3-206ENST00000528036 PAPSS2O95340 614 aaPredicted RBP24.64■■□□□ 1.54
PKP3-206ENST00000528036 KRT13P13646 458 aa24.64■■□□□ 1.54
PKP3-206ENST00000528036 HDCP19113 662 aa24.64■■□□□ 1.54
PKP3-206ENST00000528036 PLEKHO2Q8TD55 490 aa24.64■■□□□ 1.54
PKP3-206ENST00000528036 RUBCNQ92622 972 aa24.64■■□□□ 1.54
PKP3-206ENST00000528036 SECISBP2LQ93073 1101 aaKnown RBP24.64■■□□□ 1.54
PKP3-206ENST00000528036 SLITRK1Q96PX8 696 aa24.64■■□□□ 1.54
PKP3-206ENST00000528036 IMPG2Q9BZV3 1241 aa24.64■■□□□ 1.54
PKP3-206ENST00000528036 SMG9Q9H0W8 520 aaKnown RBP24.64■■□□□ 1.54
PKP3-206ENST00000528036 TRPC7Q9HCX4 862 aa24.64■■□□□ 1.54
PKP3-206ENST00000528036 TADA3O75528 432 aa24.63■■□□□ 1.53
PKP3-206ENST00000528036 RTN3O95197 1032 aaPredicted RBP24.63■■□□□ 1.53
PKP3-206ENST00000528036 NR2F2P24468 414 aa24.63■■□□□ 1.53
PKP3-206ENST00000528036 VAMP7P51809 220 aa24.63■■□□□ 1.53
PKP3-206ENST00000528036 GRSF1Q12849 480 aaKnown RBP eCLIP24.63■■□□□ 1.53
PKP3-206ENST00000528036 NR1H3Q13133 447 aa24.63■■□□□ 1.53
PKP3-206ENST00000528036 MTF1Q14872 753 aa24.63■■□□□ 1.53
PKP3-206ENST00000528036 SV2AQ7L0J3 742 aa24.63■■□□□ 1.53
PKP3-206ENST00000528036 UNC93AQ86WB7 457 aa24.63■■□□□ 1.53
PKP3-206ENST00000528036 CPA6Q8N4T0 437 aa24.63■■□□□ 1.53
PKP3-206ENST00000528036 PDZD8Q8NEN9 1154 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms