RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 JADE1Q6IE81 842 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 CNNM4Q6P4Q7 775 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 CRELD2Q6UXH1 353 aaPredicted RBP11.33□□□□□ -0.6
CPSF1-203ENST00000527916 HSCBQ8IWL3 235 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 CCDC65Q8IXS2 484 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 CPA6Q8N4T0 437 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 POMGNT1Q8WZA1 660 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 PIGKQ92643 395 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 SEPT5Q99719 369 aaPredicted RBP11.33□□□□□ -0.6
CPSF1-203ENST00000527916 PANK2Q9BZ23 570 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 TMEM206Q9H813 350 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 TDP1Q9NUW8 608 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 KBTBD4Q9NVX7 518 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 TFIP11Q9UBB9 837 aaKnown RBP11.33□□□□□ -0.6
CPSF1-203ENST00000527916 KLK13Q9UKR3 277 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 INVSQ9Y283 1065 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 TCHHQ07283 1943 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 BPTFQ12830 3046 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 OTOL1A6NHN0 477 aaPredicted RBP11.32□□□□□ -0.6
CPSF1-203ENST00000527916 PATE3B3GLJ2 98 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 TISP43B9A030 160 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 SOAT2O75908 522 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 IL18RAPO95256 599 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 GCNT3O95395 438 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 ZSCAN22P10073 491 aaPredicted RBP11.32□□□□□ -0.6
CPSF1-203ENST00000527916 ODC1P11926 461 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 IDEP14735 1019 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 GJA4P35212 333 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 DPP6P42658 865 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 AMPD3Q01432 767 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 E2F4Q16254 413 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 MGAT5BQ3V5L5 792 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 TRIM61Q5EBN2 209 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 PROSER1Q86XN7 944 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 TTC9BQ8N6N2 239 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 MAB21L3Q8N8X9 362 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 CD101Q93033 1021 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 CHFRQ96EP1 664 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 LPIN3Q9BQK8 851 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 IL21Q9HBE4 155 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 FBRSL1Q9HCM7 1045 aaKnown RBP11.32□□□□□ -0.6
CPSF1-203ENST00000527916 ADAMTS20P59510 1910 aa11.32□□□□□ -0.6
CPSF1-203ENST00000527916 APC2O95996 2303 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 SPAARA0A1B0GVQ0 90 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 EIF4E1BA6NMX2 242 aaKnown RBP11.31□□□□□ -0.6
CPSF1-203ENST00000527916 UPK3BL1B0FP48 263 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 UPK3BL2E5RIL1 263 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 KIAA0391O15091 583 aaKnown RBP11.31□□□□□ -0.6
CPSF1-203ENST00000527916 MAP3K13O43283 966 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 HSP90AA1P07900 732 aaKnown RBP11.31□□□□□ -0.6
CPSF1-203ENST00000527916 NFICP08651 508 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 ARSAP15289 507 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 MAPK8P45983 427 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 GUCY2FP51841 1108 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 CASP5P51878 434 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 ATXN3P54252 364 aaPredicted RBP11.31□□□□□ -0.6
CPSF1-203ENST00000527916 KCNA1Q09470 495 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 NR1H3Q13133 447 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 SOWAHCQ53LP3 525 aaPredicted RBP11.31□□□□□ -0.6
CPSF1-203ENST00000527916 LMBRD2Q68DH5 695 aaPredicted RBP11.31□□□□□ -0.6
CPSF1-203ENST00000527916 STXBP4Q6ZWJ1 553 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 LPCAT2Q7L5N7 544 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 PDZD3Q86UT5 571 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 HDDC3Q8N4P3 179 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 PDILTQ8N807 584 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 IQUBQ8NA54 791 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 MRPS31Q92665 395 aaKnown RBP11.31□□□□□ -0.6
CPSF1-203ENST00000527916 USP13Q92995 863 aaPredicted RBP11.31□□□□□ -0.6
CPSF1-203ENST00000527916 ATP2A3Q93084 1043 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 SPACA7Q96KW9 195 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 CNOT6LQ96LI5 555 aaKnown RBP11.31□□□□□ -0.6
CPSF1-203ENST00000527916 TPSD1Q9BZJ3 242 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 MAGEF1Q9HAY2 307 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 TBC1D7Q9P0N9 293 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 DSEQ9UL01 958 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 CFAP45Q9UL16 551 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 CCL26Q9Y258 94 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 GPSM3Q9Y4H4 160 aa11.31□□□□□ -0.6
CPSF1-203ENST00000527916 TSC2P49815 1807 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 FAM221BA6H8Z2 402 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 TNFRSF10BO14763 440 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 PPEF2O14830 753 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 ALDH1A2O94788 518 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 F13A1P00488 732 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 IFNAR2P48551 515 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 TAF6P49848 677 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 SMARCB1Q12824 385 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 HNRNPDQ14103 355 aaKnown RBP11.3□□□□□ -0.6
CPSF1-203ENST00000527916 ZNF268Q14587 947 aaPredicted RBP11.3□□□□□ -0.6
CPSF1-203ENST00000527916 ZNF423Q2M1K9 1284 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 SLC39A12Q504Y0 691 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 ANO7Q6IWH7 933 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 C19orf48Q6RUI8 117 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 SHC4Q6S5L8 630 aa11.3□□□□□ -0.6
CPSF1-203ENST00000527916 PIP4P1Q86T03 277 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms