RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ORC1Q13415 861 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 NFIL3Q16649 462 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 SGSM1Q2NKQ1 1148 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 C1orf220Q5T0J3 134 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 ZNF658Q5TYW1 1059 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-213ENST00000527897 VSTM1Q6UX27 236 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 CMTM8Q8IZV2 173 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 B3GALNT2Q8NCR0 500 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 BPIFB1Q8TDL5 484 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 LRRC3BQ96PB8 259 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 GSDMAQ96QA5 445 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 TSG101Q99816 390 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 DDX23Q9BUQ8 820 aaKnown RBP16.56■□□□□ 0.24
CAPN1-213ENST00000527897 BCO2Q9BYV7 579 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 IMPG2Q9BZV3 1241 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 SDCBP2Q9H190 292 aa16.56■□□□□ 0.24
CAPN1-213ENST00000527897 CACNA1HO95180 2353 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 F8VP50 259 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 IKBKBO14920 756 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 TRIM66O15016 1216 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 CETN3O15182 167 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 MAPK13O15264 365 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 CHADO15335 359 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 GADD45BO75293 160 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-213ENST00000527897 FAM163BP0C2L3 166 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 EPB41P11171 864 aaKnown RBP16.55■□□□□ 0.24
CAPN1-213ENST00000527897 TARSP26639 723 aaKnown RBP16.55■□□□□ 0.24
CAPN1-213ENST00000527897 PPP3CAQ08209 521 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 ZCWPW2Q504Y3 356 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 TRMT2BQ96GJ1 504 aaKnown RBP16.55■□□□□ 0.24
CAPN1-213ENST00000527897 TIGD1Q96MW7 591 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 B3GNT5Q9BYG0 378 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 ZNF518BQ9C0D4 1074 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 VRTNQ9H8Y1 702 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 SPATA6Q9NWH7 488 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-213ENST00000527897 MRPS17Q9Y2R5 130 aaKnown RBP16.55■□□□□ 0.24
CAPN1-213ENST00000527897 MYH10P35580 1976 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 GREB1Q4ZG55 1949 aa16.55■□□□□ 0.24
CAPN1-213ENST00000527897 MAN2B1O00754 1011 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 NCAM2O15394 837 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 TADA3O75528 432 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 ABL1P00519 1130 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 CCNE1P24864 410 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 DDX6P26196 483 aaKnown RBP eCLIP16.54■□□□□ 0.24
CAPN1-213ENST00000527897 SOX9P48436 509 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 CACNA2D1P54289 1103 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 FCHO2Q0JRZ9 810 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 EDRF1Q3B7T1 1238 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 ARHGAP29Q52LW3 1261 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 DCAF17Q5H9S7 520 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-213ENST00000527897 TCERG1LQ5VWI1 586 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 DENND5BQ6ZUT9 1274 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 ACOT1Q86TX2 421 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 CELF5Q8N6W0 485 aaKnown RBP16.54■□□□□ 0.24
CAPN1-213ENST00000527897 TAS1R2Q8TE23 839 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 FAM3CQ92520 227 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 TNIP3Q96KP6 325 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 ELOVL4Q9GZR5 314 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 THG1LQ9NWX6 298 aaKnown RBP16.54■□□□□ 0.24
CAPN1-213ENST00000527897 DLGAP2Q9P1A6 1054 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 CIZ1Q9ULV3 898 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-213ENST00000527897 CCL26Q9Y258 94 aa16.54■□□□□ 0.24
CAPN1-213ENST00000527897 KIF26AQ9ULI4 1882 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-213ENST00000527897 COL4A2P08572 1712 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 ATP8B3O60423 1300 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 TRAV19A0A0A6YYK7 116 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 TRIM49BA6NDI0 452 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 ASS1P00966 412 aaKnown RBP16.53■□□□□ 0.24
CAPN1-213ENST00000527897 CKMP06732 381 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 NDST1P52848 882 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 USP46P62068 366 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 TNK2Q07912 1038 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 STIM1Q13586 685 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 ANKRD40Q6AI12 368 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 MON1AQ86VX9 555 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 C1orf210Q8IVY1 113 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 CCDC150Q8NCX0 1101 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 TAF4BQ92750 862 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 USP13Q92995 863 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-213ENST00000527897 SPATA17Q96L03 361 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 MYRFLQ96LU7 910 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 CYP2S1Q96SQ9 504 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 NELL2Q99435 816 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 TDP1Q9NUW8 608 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 OBP2AQ9NY56 170 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 GTSE1Q9NYZ3 720 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 HMGXB4Q9UGU5 601 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 ZMYM5Q9UJ78 669 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 ANAPC1Q9H1A4 1944 aa16.53■□□□□ 0.24
CAPN1-213ENST00000527897 C2orf78A6NCI8 922 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 ARNTLO00327 626 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 BIN1O00499 593 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 CD58P19256 250 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 PMS1P54277 932 aaKnown RBP16.52■□□□□ 0.24
CAPN1-213ENST00000527897 NOP14P78316 857 aaKnown RBP16.52■□□□□ 0.24
CAPN1-213ENST00000527897 KLHL10Q6JEL2 608 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 FRMD5Q7Z6J6 570 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 FAM35AQ86V20 835 aa16.52■□□□□ 0.24
CAPN1-213ENST00000527897 ARL14EPQ8N8R7 260 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-213ENST00000527897 SLC22A12Q96S37 553 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms