RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 HMGXB4Q9UGU5 601 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 AGAP1Q9UPQ3 857 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 H3BRB1 525 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 CST8O60676 142 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 ZSCAN5DPP0CG00 497 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 HOXD8P13378 290 aaPredicted RBP16.12■□□□□ 0.17
USH1C-207ENST00000527720 BRAFP15056 766 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 OTUD4Q01804 1114 aaKnown RBP16.12■□□□□ 0.17
USH1C-207ENST00000527720 RASA2Q15283 850 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 DCAF4L1Q3SXM0 396 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 GJC2Q5T442 439 aaPredicted RBP16.12■□□□□ 0.17
USH1C-207ENST00000527720 LCLAT1Q6UWP7 414 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 ARHGEF18Q6ZSZ5 1173 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 APBB1IPQ7Z5R6 666 aaPredicted RBP16.12■□□□□ 0.17
USH1C-207ENST00000527720 CNPY4Q8N129 248 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 ACTL9Q8TC94 416 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 HEXIM2Q96MH2 286 aaKnown RBP16.12■□□□□ 0.17
USH1C-207ENST00000527720 OSBPL7Q9BZF2 842 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 TUT1Q9H6E5 874 aaKnown RBP16.12■□□□□ 0.17
USH1C-207ENST00000527720 UBN1Q9NPG3 1134 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 DERAQ9Y315 318 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 FARP1Q9Y4F1 1045 aaPredicted RBP16.12■□□□□ 0.17
USH1C-207ENST00000527720 APOC4-APOC2K7ER74 178 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 CSDE1O75534 798 aaKnown RBP16.11■□□□□ 0.17
USH1C-207ENST00000527720 APOC2P02655 101 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 VIMP08670 466 aaKnown RBP16.11■□□□□ 0.17
USH1C-207ENST00000527720 ZNF286BP0CG31 522 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 ETS1P14921 441 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 GRM5P41594 1212 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 GCLCP48506 637 aaPredicted RBP16.11■□□□□ 0.17
USH1C-207ENST00000527720 ZNF143P52747 638 aaPredicted RBP16.11■□□□□ 0.17
USH1C-207ENST00000527720 SMTNL2Q2TAL5 461 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 CCT6BQ92526 530 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 PRCCQ92733 491 aaPredicted RBP16.11■□□□□ 0.17
USH1C-207ENST00000527720 HAUS1Q96CS2 278 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 MORF4L1Q9UBU8 362 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 SCN1AP35498 2009 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 EXOC1LA0A1B0GW35 172 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 H0YHG0 523 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 TRUB2O95900 331 aaKnown RBP16.11■□□□□ 0.17
USH1C-207ENST00000527720 CETPP11597 493 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 MIPP30301 263 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 ADCYAP1R1P41586 468 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 IFNAR2P48551 515 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 MKRN3Q13064 507 aaKnown RBP16.11■□□□□ 0.17
USH1C-207ENST00000527720 ORC1Q13415 861 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 ANKRD20A8PQ5CZ79 823 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 CYP4F22Q6NT55 531 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 PPP1R21Q6ZMI0 780 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 PPIL6Q8IXY8 311 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 EMC1Q8N766 993 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 KCTD6Q8NC69 237 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 CKAP2Q8WWK9 683 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 MAML1Q92585 1016 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 NT5C1AQ9BXI3 368 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 RSAD1Q9HA92 442 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 PLEKHA5Q9HAU0 1116 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 KCNK9Q9NPC2 374 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 USP18Q9UMW8 372 aa16.11■□□□□ 0.17
USH1C-207ENST00000527720 NDST1P52848 882 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 GRIK4Q16099 956 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 KCNT1Q5JUK3 1230 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 FAM102AQ5T9C2 384 aaPredicted RBP16.1■□□□□ 0.17
USH1C-207ENST00000527720 CCDC13Q8IYE1 715 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 CYP4X1Q8N118 509 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 CNPY3Q9BT09 278 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 SENP1Q9P0U3 644 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 FETUBQ9UGM5 382 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 CCT8L1PA6NM43 557 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 PDHXO00330 501 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 ENDOD1O94919 500 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 IFNB1P01574 187 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 CREB1P16220 341 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 GPD1P21695 349 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 SLC18A1P54219 525 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 CDC42EP1Q00587 391 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 DUSP28Q4G0W2 176 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 RSAD2Q8WXG1 361 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 PPP1R16BQ96T49 567 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 NKIRAS1Q9NYS0 192 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 SLC24A2Q9UI40 661 aa16.1■□□□□ 0.17
USH1C-207ENST00000527720 SNAI1O95863 264 aaPredicted RBP16.09■□□□□ 0.17
USH1C-207ENST00000527720 ITGBL1O95965 494 aaPredicted RBP16.09■□□□□ 0.17
USH1C-207ENST00000527720 HIF1AQ16665 826 aa16.09■□□□□ 0.17
USH1C-207ENST00000527720 MARCH8Q5T0T0 291 aa16.09■□□□□ 0.17
USH1C-207ENST00000527720 MAP1SQ66K74 1059 aaPredicted RBP16.09■□□□□ 0.17
USH1C-207ENST00000527720 SGSM3Q96HU1 749 aa16.09■□□□□ 0.17
USH1C-207ENST00000527720 TBK1Q9UHD2 729 aa16.09■□□□□ 0.17
USH1C-207ENST00000527720 C2CD4BA6NLJ0 364 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 RASA4BC9J798 803 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 RASA4O43374 803 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 SETSIPP0DME0 302 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 CTCFP49711 727 aaPredicted RBP16.08■□□□□ 0.17
USH1C-207ENST00000527720 GTF2A2P52657 109 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 ARL4CP56559 192 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 DYNLT1P63172 113 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 TRABD2AQ86V40 505 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 RFX6Q8HWS3 928 aa16.08■□□□□ 0.17
USH1C-207ENST00000527720 SRRM1Q8IYB3 904 aaKnown RBP16.08■□□□□ 0.17
USH1C-207ENST00000527720 ZBED8Q8IZ13 594 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms