RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 TNIP3Q96KP6 325 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 CAPS2Q9BXY5 557 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 NME7Q9Y5B8 376 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 SQORQ9Y6N5 450 aa17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 PDCD11Q14690 1871 aaKnown RBP17.07■□□□□ 0.32
SNRNP35-204ENST00000527158 ARL5CA6NH57 179 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 FAM163BP0C2L3 166 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 SKIP12755 728 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 GRK4P32298 578 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 LLGL1Q15334 1064 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 TRIM71Q2Q1W2 868 aaKnown RBP17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 FAM102AQ5T9C2 384 aaPredicted RBP17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 LHX8Q68G74 356 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 AGMOQ6ZNB7 445 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 CCDC105Q8IYK2 499 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 JOSD2Q8TAC2 188 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 ZNF296Q8WUU4 475 aaPredicted RBP17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 PGBD4Q96DM1 585 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 DPEP3Q9H4B8 488 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 FAM114A2Q9NRY5 505 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 DDX56Q9NY93 547 aaKnown RBP17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 BHMG1C9JSJ3 638 aaPredicted RBP17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 CYB561D2O14569 222 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 FGFR1P11362 822 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 LMO2P25791 158 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 COILP38432 576 aaPredicted RBP17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 FNTAP49354 379 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 CORO7P57737 925 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 ACAP1Q15027 740 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 SIX1Q15475 284 aaPredicted RBP17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 TRADDQ15628 312 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 PKDCCQ504Y2 493 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 ZNF618Q5T7W0 954 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 OR6B2Q6IFH4 312 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 TTC30AQ86WT1 665 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 C12orf50Q8NA57 414 aaPredicted RBP17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 SEC14L1Q92503 715 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 OSBPL7Q9BZF2 842 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 LRRC19Q9H756 370 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 HOMER3Q9NSC5 361 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 RSPH14Q9UHP6 348 aa17.06■□□□□ 0.32
SNRNP35-204ENST00000527158 A0A0U1RQF3 1178 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 E5RJQ4 531 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 PODXLO00592 558 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 RALAP11233 206 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 WARSP23381 471 aaKnown RBP17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 DSC3Q14574 896 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 HADHQ16836 314 aaKnown RBP17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 JAMLQ86YT9 394 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 ANKRD52Q8NB46 1076 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 RNF169Q8NCN4 708 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 STK32AQ8WU08 396 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 ADAM2Q99965 735 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 ERP44Q9BS26 406 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 OSBPL8Q9BZF1 889 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 UBN1Q9NPG3 1134 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 STARD7Q9NQZ5 370 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 A0A1W2PQ45 241 aaPredicted RBP17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 A0A1W2PQY0 241 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 DAPK3O43293 454 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 MGEA5O60502 916 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 RNF8O76064 485 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 KRT1P04264 644 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 RPL9P32969 192 aaKnown RBP17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 RGS7P49802 495 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 IRAK1P51617 712 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 CFAP58Q5T655 872 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 EMC10Q5UCC4 262 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 PMF1Q6P1K2 205 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 POLNQ7Z5Q5 900 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 EMC1Q8N766 993 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 SLC35F5Q8WV83 523 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 PPM1EQ8WY54 764 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 RIN2Q8WYP3 895 aaPredicted RBP17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 RNF25Q96BH1 459 aaPredicted RBP17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 TRIM51Q9BSJ1 452 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 HEMGNQ9BXL5 484 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 SLC4A5Q9BY07 1137 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 RSAD1Q9HA92 442 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 TMEM51Q9NW97 253 aa17.05■□□□□ 0.32
SNRNP35-204ENST00000527158 PIK3R2O00459 728 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 KRT7P08729 469 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 CKBP12277 381 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 PTGIRP43119 386 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 SCNN1GP51170 649 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 BCAT1P54687 386 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 COPS2P61201 443 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 BST2Q10589 180 aaKnown RBP17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 TTC27Q6P3X3 843 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 FAM183BPQ6ZVS7 135 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 TMEM110Q86TL2 294 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 DDX42Q86XP3 938 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 SPATS2Q86XZ4 545 aaKnown RBP17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 DPH5Q9H2P9 285 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 ASNSD1Q9NWL6 643 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 MIOSQ9NXC5 875 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 EIF3HO15372 352 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 HCRTO43612 131 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 TCF4P15884 667 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms