RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 HCFC1R1Q9NWW0 138 aa17.67■□□□□ 0.42
SMCO4-204ENST00000527149 IFNKQ9P0W0 207 aa17.67■□□□□ 0.42
SMCO4-204ENST00000527149 DAAM1Q9Y4D1 1078 aa17.67■□□□□ 0.42
SMCO4-204ENST00000527149 F8VP50 259 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 FOXN3O00409 490 aaPredicted RBP17.66■□□□□ 0.42
SMCO4-204ENST00000527149 NRG2O14511 850 aaPredicted RBP17.66■□□□□ 0.42
SMCO4-204ENST00000527149 AP5Z1O43299 807 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 KCNQ1P51787 676 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 EPHA5P54756 1037 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 UBASH3AP57075 661 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 POLR2FP61218 127 aaKnown RBP17.66■□□□□ 0.42
SMCO4-204ENST00000527149 PLD1Q13393 1074 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 DRAP1Q14919 205 aaPredicted RBP17.66■□□□□ 0.42
SMCO4-204ENST00000527149 DDR2Q16832 855 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 SDHAF4Q5VUM1 108 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 TMC8Q8IU68 726 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 FAM71AQ8IYT1 594 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 PSMG2Q969U7 264 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 C8orf48Q96LL4 319 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 HEXIM2Q96MH2 286 aaKnown RBP17.66■□□□□ 0.42
SMCO4-204ENST00000527149 XPO4Q9C0E2 1151 aaKnown RBP17.66■□□□□ 0.42
SMCO4-204ENST00000527149 CSNK1G1Q9HCP0 422 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 ACP6Q9NPH0 428 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 DNMT3BQ9UBC3 853 aaKnown RBP17.66■□□□□ 0.42
SMCO4-204ENST00000527149 MUC3AQ02505 3323 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 DENND4CQ5VZ89 1909 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 BDP1A6H8Y1 2624 aa17.66■□□□□ 0.42
SMCO4-204ENST00000527149 SPDYE4A6NLX3 237 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 XYLBO75191 536 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 BEST1O76090 585 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 VDRP11473 427 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 KRT5P13647 590 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 HMGA1P17096 107 aaKnown RBP17.65■□□□□ 0.42
SMCO4-204ENST00000527149 BRD2P25440 801 aaKnown RBP17.65■□□□□ 0.42
SMCO4-204ENST00000527149 ADORA2BP29275 332 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 RAPGEF1Q13905 1077 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 SMAD2Q15796 467 aaKnown RBP17.65■□□□□ 0.42
SMCO4-204ENST00000527149 PKDCCQ504Y2 493 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 SGO2Q562F6 1265 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 SARM1Q6SZW1 724 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 CLEC20AQ6ZU45 233 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 TTC30AQ86WT1 665 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 GPR152Q8TDT2 470 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 SMOQ99835 787 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 STK33Q9BYT3 514 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 POMKQ9H5K3 350 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 ZNF334Q9HCZ1 680 aaPredicted RBP17.65■□□□□ 0.42
SMCO4-204ENST00000527149 DMAP1Q9NPF5 467 aaPredicted RBP17.65■□□□□ 0.42
SMCO4-204ENST00000527149 AVENQ9NQS1 362 aaPredicted RBP17.65■□□□□ 0.42
SMCO4-204ENST00000527149 ATP8B3O60423 1300 aa17.65■□□□□ 0.42
SMCO4-204ENST00000527149 TRIM66O15016 1216 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 AP1G2O75843 785 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 FAM200BP0CF97 657 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 IL9P15248 144 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 CLCN1P35523 988 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 MTHFRP42898 656 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 ALDH1A3P47895 512 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 EPHB3P54753 998 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 RPL10AP62906 217 aaKnown RBP17.64■□□□□ 0.41
SMCO4-204ENST00000527149 NTHL1P78549 312 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 CBX2Q14781 532 aaPredicted RBP17.64■□□□□ 0.41
SMCO4-204ENST00000527149 PTCRAQ6ISU1 281 aaPredicted RBP17.64■□□□□ 0.41
SMCO4-204ENST00000527149 CES5AQ6NT32 575 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 GRASPQ7Z6J2 395 aaPredicted RBP17.64■□□□□ 0.41
SMCO4-204ENST00000527149 SCN4BQ8IWT1 228 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 NEK11Q8NG66 645 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 GIPC2Q8TF65 315 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 ATXN2LQ8WWM7 1075 aaKnown RBP17.64■□□□□ 0.41
SMCO4-204ENST00000527149 SPATA17Q96L03 361 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 KCNK16Q96T55 309 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 MED10Q9BTT4 135 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 DNAI2Q9GZS0 605 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 IL21Q9HBE4 155 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 WDR6Q9NNW5 1121 aaKnown RBP17.64■□□□□ 0.41
SMCO4-204ENST00000527149 NLRC4Q9NPP4 1024 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 TSPAN16Q9UKR8 245 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 KIAA1257Q9ULG3 409 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.64■□□□□ 0.41
SMCO4-204ENST00000527149 ASB3Q9Y575 518 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 CLUHO75153 1309 aa17.64■□□□□ 0.41
SMCO4-204ENST00000527149 ANAPC1Q9H1A4 1944 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 HHLA1C9JL84 531 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 TNFRSF10BO14763 440 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 CYP26A1O43174 497 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 SLC34A2O95436 690 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 RHOP08100 348 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 CD19P15391 556 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 NPR3P17342 541 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 TRIM21P19474 475 aaKnown RBP17.63■□□□□ 0.41
SMCO4-204ENST00000527149 CCR2P41597 374 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 MTMR3Q13615 1198 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 SLC5A9Q2M3M2 681 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 GOLGA7BQ2TAP0 167 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 PUS10Q3MIT2 529 aaKnown RBP17.63■□□□□ 0.41
SMCO4-204ENST00000527149 PRSS36Q5K4E3 855 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 LCLAT1Q6UWP7 414 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 DNAJB7Q7Z6W7 309 aaPredicted RBP17.63■□□□□ 0.41
SMCO4-204ENST00000527149 HS6ST3Q8IZP7 471 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 BAP1Q92560 729 aa17.63■□□□□ 0.41
SMCO4-204ENST00000527149 CEP295NLQ96MC4 621 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms