RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SUGP1Q8IWZ8 645 aaKnown RBP18.46■□□□□ 0.55
USH1C-205ENST00000527020 SHCBP1Q8NEM2 672 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 CMASQ8NFW8 434 aaPredicted RBP18.46■□□□□ 0.55
USH1C-205ENST00000527020 SYNCQ9H7C4 482 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 CYP3A43Q9HB55 503 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 PCSK1NQ9UHG2 260 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 SCN1AP35498 2009 aa18.46■□□□□ 0.55
USH1C-205ENST00000527020 RASA4BC9J798 803 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 RASA4O43374 803 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 CYP2C8P10632 490 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 MYO1EQ12965 1108 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 LAMC2Q13753 1193 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 TRNP1Q6NT89 227 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 ZBED8Q8IZ13 594 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 HPDLQ96IR7 371 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 PEBP4Q96S96 227 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.45■□□□□ 0.54
USH1C-205ENST00000527020 RNF181Q9P0P0 153 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 AKT3Q9Y243 479 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 ZNF286BP0CG31 522 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 PDE4CQ08493 712 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 ZNF792Q3KQV3 632 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 NUGGCQ68CJ6 796 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 TRPM8Q7Z2W7 1104 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 UBA3Q8TBC4 463 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 CPT1BQ92523 772 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 ABCF3Q9NUQ8 709 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 SLC12A4Q9UP95 1085 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 KAT6AQ92794 2004 aa18.45■□□□□ 0.54
USH1C-205ENST00000527020 GOLGA8MH3BSY2 632 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 MAGEB2O15479 319 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 DNAJC8O75937 253 aaPredicted RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 TRUB2O95900 331 aaKnown RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 HMGCRP04035 888 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 VDRP11473 427 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 RPL22P35268 128 aaKnown RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 CTCFP49711 727 aaPredicted RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 WDR4P57081 412 aaKnown RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 GPX6P59796 221 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 INCA1Q0VD86 236 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 PDIA2Q13087 525 aaKnown RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 TMEM132DQ14C87 1099 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 MSS51Q4VC12 460 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 RAB6CQ53S08 254 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 SH3PXD2AQ5TCZ1 1133 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 CGB2Q6NT52 195 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 CAPN12Q6ZSI9 719 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 CYP4V2Q6ZWL3 525 aaPredicted RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 CENPUQ71F23 418 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 UNC45BQ8IWX7 931 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 NAT8LQ8N9F0 302 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 TTC13Q8NBP0 860 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 AFG1LQ8WV93 481 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 WDR83Q9BRX9 315 aaKnown RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 C16orf70Q9BSU1 422 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 FRMD8P1Q9BZ68 369 aaPredicted RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 RAB6CQ9H0N0 254 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 HAUS2Q9NVX0 235 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 AGAP1Q9UPQ3 857 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 USP15Q9Y4E8 981 aaPredicted RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 CLUHO75153 1309 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 POC1B-GALNT4F8VUJ3 575 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 FOXN2P32314 431 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 NDST1P52848 882 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 XRCC4Q13426 336 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 ARHGEF18Q6ZSZ5 1173 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 PIWIL1Q96J94 861 aaKnown RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 MAGEB18Q96M61 343 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 HEXIM2Q96MH2 286 aaKnown RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 TGS1Q96RS0 853 aaKnown RBP18.44■□□□□ 0.54
USH1C-205ENST00000527020 VPS37BQ9H9H4 285 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 USP18Q9UMW8 372 aa18.44■□□□□ 0.54
USH1C-205ENST00000527020 TSPAN1O60635 241 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 STX2P32856 288 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 ACAP1Q15027 740 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 PKN2Q16513 984 aaKnown RBP18.43■□□□□ 0.54
USH1C-205ENST00000527020 HIF1AQ16665 826 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 FNBP1LQ5T0N5 605 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 FAM102AQ5T9C2 384 aaPredicted RBP18.43■□□□□ 0.54
USH1C-205ENST00000527020 MTHFD1LQ6UB35 978 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 ANKMY2Q8IV38 441 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 PPIL6Q8IXY8 311 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 KCTD6Q8NC69 237 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 PPTC7Q8NI37 304 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 HSPH1Q92598 858 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 KATNBL1Q9H079 304 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 KIF9Q9HAQ2 790 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 NKIRAS1Q9NYS0 192 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 BARX2Q9UMQ3 279 aaPredicted RBP18.43■□□□□ 0.54
USH1C-205ENST00000527020 RALGAPA2Q2PPJ7 1873 aa18.43■□□□□ 0.54
USH1C-205ENST00000527020 TCRBV7S3A2A0A539 114 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 FAM47DPA6NHR8 397 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 ENDOD1O94919 500 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 PFKMP08237 780 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 TAC1P20366 129 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 PCGF5Q86SE9 256 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 RFX6Q8HWS3 928 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 FUKQ8N0W3 1084 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 DENND1AQ8TEH3 1009 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 ADPGKQ9BRR6 497 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms