RNA–Protein interactions for RNA: ENST00000526977.5

VPS28-207, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-207ENST00000526977 CTNNA2P26232 953 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 CTNNA1P35221 906 aaKnown RBP19.94■□□□□ 0.78
VPS28-207ENST00000526977 GATMP50440 423 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 WDR5P61964 334 aaKnown RBP19.94■□□□□ 0.78
VPS28-207ENST00000526977 STILQ15468 1287 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 SGO2Q562F6 1265 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 LIN9Q5TKA1 542 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 C7orf61Q8IZ16 206 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 CRYBG2Q8N1P7 616 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 TFAP2BQ92481 460 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 BADQ92934 168 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 TNIP3Q96KP6 325 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 C11orf70Q9BRQ4 267 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 TMEM175Q9BSA9 504 aa19.94■□□□□ 0.78
VPS28-207ENST00000526977 CCDC66A2RUB6 948 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 TRAPPC3O43617 180 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 LSM8O95777 96 aaKnown RBP19.93■□□□□ 0.78
VPS28-207ENST00000526977 FGBP02675 491 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 TNNT3P45378 269 aaPredicted RBP19.93■□□□□ 0.78
VPS28-207ENST00000526977 CARSP49589 748 aaKnown RBP19.93■□□□□ 0.78
VPS28-207ENST00000526977 C1QBPQ07021 282 aaKnown RBP19.93■□□□□ 0.78
VPS28-207ENST00000526977 CNGA2Q16280 664 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 WSCD1Q658N2 575 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 SUSD3Q96L08 255 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 NAP1L3Q99457 506 aaPredicted RBP19.93■□□□□ 0.78
VPS28-207ENST00000526977 ZNF518BQ9C0D4 1074 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 DNAJB4Q9UDY4 337 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 CEP83Q9Y592 693 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 B4GALT3O60512 393 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 PYGMP11217 842 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 MAMLD1Q13495 774 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 CLUL1Q15846 466 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 MMS22LQ6ZRQ5 1243 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 METTL23Q86XA0 190 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 CASKIN2Q8WXE0 1202 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 COLEC11Q9BWP8 271 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 LHX5Q9H2C1 402 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 VIPAS39Q9H9C1 493 aa19.93■□□□□ 0.78
VPS28-207ENST00000526977 ESYT3A0FGR9 886 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 MYO1FO00160 1098 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 CYP11A1P05108 521 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 MMP8P22894 467 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 ORC1Q13415 861 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 TRADDQ15628 312 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 PAN2Q504Q3 1202 aaKnown RBP19.92■□□□□ 0.78
VPS28-207ENST00000526977 PLEKHA7Q6IQ23 1121 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 C16orf59Q7L2K0 433 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 ADAT2Q7Z6V5 191 aaKnown RBP19.92■□□□□ 0.78
VPS28-207ENST00000526977 ACOT1Q86TX2 421 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 WDTC1Q8N5D0 677 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 SLITRK6Q9H5Y7 841 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 FAN1Q9Y2M0 1017 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 BHMG1C9JSJ3 638 aaPredicted RBP19.92■□□□□ 0.78
VPS28-207ENST00000526977 NRP1O14786 923 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 TADA2AO75478 443 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 PDGFRBP09619 1106 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 LMO2P25791 158 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 BRCC3P46736 316 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 OTOP2Q7RTS6 562 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 TMEM35BQ8NCS4 154 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 HASPINQ8TF76 798 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 IFT81Q8WYA0 676 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 AMACRQ9UHK6 382 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 NME7Q9Y5B8 376 aa19.92■□□□□ 0.78
VPS28-207ENST00000526977 ITGB1P05556 798 aa19.91■□□□□ 0.78
VPS28-207ENST00000526977 TYMPP19971 482 aa19.91■□□□□ 0.78
VPS28-207ENST00000526977 CDH5P33151 784 aaPredicted RBP19.91■□□□□ 0.78
VPS28-207ENST00000526977 EPHB4P54760 987 aa19.91■□□□□ 0.78
VPS28-207ENST00000526977 DEFB103AP81534 67 aa19.91■□□□□ 0.78
VPS28-207ENST00000526977 LTBP2Q14767 1821 aa19.91■□□□□ 0.78
VPS28-207ENST00000526977 LCLAT1Q6UWP7 414 aa19.91■□□□□ 0.78
VPS28-207ENST00000526977 ZNF365Q70YC5 407 aa19.91■□□□□ 0.78
VPS28-207ENST00000526977 ZNF689Q96CS4 500 aaPredicted RBP19.91■□□□□ 0.78
VPS28-207ENST00000526977 MRPL47Q9HD33 250 aaKnown RBP19.91■□□□□ 0.78
VPS28-207ENST00000526977 DDX43Q9NXZ2 648 aaKnown RBP19.91■□□□□ 0.78
VPS28-207ENST00000526977 HPCAL4Q9UM19 191 aa19.91■□□□□ 0.78
VPS28-207ENST00000526977 NFU1Q9UMS0 254 aa19.91■□□□□ 0.78
VPS28-207ENST00000526977 PCDHB8Q9UN66 801 aa19.91■□□□□ 0.78
VPS28-207ENST00000526977 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.91■□□□□ 0.78
VPS28-207ENST00000526977 PRG3Q9Y2Y8 225 aaPredicted RBP19.91■□□□□ 0.78
VPS28-207ENST00000526977 O00370 1275 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 GALTP07902 379 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 SLC1A1P43005 524 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 RWDD2BP57060 319 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 EMBQ6PCB8 327 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 PSRC1Q6PGN9 363 aaPredicted RBP19.9■□□□□ 0.78
VPS28-207ENST00000526977 SND1Q7KZF4 910 aaKnown RBP eCLIP19.9■□□□□ 0.78
VPS28-207ENST00000526977 C12orf29Q8N999 325 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 CCDC26Q8TAB7 109 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 ZBTB9Q96C00 473 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 H3BQF6 201 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 PCSK1P29120 753 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 ARHGAP17Q68EM7 881 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 MAATS1Q7Z4T9 603 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 OSTM1Q86WC4 334 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 C1orf131Q8NDD1 294 aaKnown RBP19.9■□□□□ 0.78
VPS28-207ENST00000526977 ABHD8Q96I13 439 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 PARVAQ9NVD7 372 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 ADAM28Q9UKQ2 775 aa19.9■□□□□ 0.78
VPS28-207ENST00000526977 TIMM13Q9Y5L4 95 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms