RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 RP9Q8TA86 221 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 R3HDM4Q96D70 268 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 PUS7Q96PZ0 661 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 GLOD4Q9HC38 313 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 SSX2IPQ9Y2D8 614 aa3.6□□□□□ -1.83
ECHDC1-219ENST00000526299 TLDC2A0PJX2 215 aa3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 H7C1Q1 480 aa3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 GTPBP1O00178 669 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 ALDH5A1P51649 535 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 HYAL1Q12794 435 aa3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 ZNF268Q14587 947 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 KIRREL2Q6UWL6 708 aa3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 CBARPQ8N350 705 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 CPA6Q8N4T0 437 aa3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 ATG4AQ8WYN0 398 aa3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 DDX17Q92841 729 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 PTDSS2Q9BVG9 487 aa3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 FAM126AQ9BYI3 521 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 PUS7LQ9H0K6 701 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 HIPK2Q9H2X6 1198 aa3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 SERPINB13Q9UIV8 391 aa3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 POLHQ9Y253 713 aa3.59□□□□□ -1.83
ECHDC1-219ENST00000526299 ERVV-2B6SEH9 535 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 UBE2Q2LH0YL09 131 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 DCLK1O15075 740 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 SMAD6O43541 496 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 USP1O94782 785 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 MYBL2P10244 700 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 HSD3B2P26439 372 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 PXNP49023 591 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 LILRA4P59901 499 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 GHRHRQ02643 423 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 E2F2Q14209 437 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 IQCB1Q15051 598 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 PCBP2Q15366 365 aaKnown RBP eCLIP3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 LONRF3Q496Y0 759 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 C10orf25Q5T742 122 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 MEX3CQ5U5Q3 659 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 CUL5Q93034 780 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 TEKT5Q96M29 485 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 LENG8Q96PV6 779 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 CTAGE1Q96RT6 745 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 EFHD1Q9BUP0 239 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 DPCDQ9BVM2 203 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 MRPL46Q9H2W6 279 aaKnown RBP3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 TFCP2L1Q9NZI6 479 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 HESX1Q9UBX0 185 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 ABCF2Q9UG63 623 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 ZDHHC8Q9ULC8 765 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 MRFAP1Q9Y605 127 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 TTC3P53804 2025 aa3.58□□□□□ -1.84
ECHDC1-219ENST00000526299 FAM90A8PA6NJQ4 464 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 H3BNX3 289 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 FZD9O00144 591 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 ARIH2O95376 493 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 CRYABP02511 175 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 AHSGP02765 367 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 CHRM5P08912 532 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 ATXN1LP0C7T5 689 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 FAM90A13PP0C7W8 464 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 FAM90A24PP0C7X0 464 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 FTH1P19P0C7X4 201 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 CYP19A1P11511 503 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 RENBPP51606 427 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 TPTEP56180 551 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 AMOTQ4VCS5 1084 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 UBAP2Q5T6F2 1119 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 RGS7BPQ6MZT1 257 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 ZNF813Q6ZN06 617 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 HEATR3Q7Z4Q2 680 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 PIP4P1Q86T03 277 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 PCSK9Q8NBP7 692 aaKnown RBP3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 SNX18Q96RF0 628 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 THAP7Q9BT49 309 aaPredicted RBP3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 CIPCQ9C0C6 399 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 PCDHA1Q9Y5I3 950 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 SQORQ9Y6N5 450 aa3.57□□□□□ -1.84
ECHDC1-219ENST00000526299 TCRBV5S1A1TA0A578 114 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 PRSS44E7EML9 344 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 hCG_1984214I3L0E3 225 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 A1BGP04217 495 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 DLDP09622 509 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 LOXL3P58215 753 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 ZNF91Q05481 1191 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 FAM187BQ17R55 369 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 EFCAB2Q5VUJ9 269 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 PPP1R3BQ86XI6 285 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 ADAMTS18Q8TE60 1221 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 CCDC17Q96LX7 622 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 CAMK1GQ96NX5 476 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 TRMOQ9BU70 441 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 WDCPQ9H6R7 721 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 POT1Q9NUX5 634 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 MDFICQ9P1T7 246 aa3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 NDRG4Q9ULP0 352 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 MRPS17Q9Y2R5 130 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-219ENST00000526299 AP4M1O00189 453 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 CLSTN1O94985 981 aa3.55□□□□□ -1.84
ECHDC1-219ENST00000526299 VIL1P09327 827 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms