RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 RPS16P62249 146 aaKnown RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 CDC42EP1Q00587 391 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ROM1Q03395 351 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 PPP3CAQ08209 521 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 SLC12A1Q13621 1099 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 BECN1Q14457 450 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 UBE3CQ15386 1083 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 SKIDA1Q1XH10 827 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 C3orf38Q5JPI3 329 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 MAP3K21Q5TCX8 1036 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 PRAMEF9Q5VWM5 478 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 BTBD8Q5XKL5 378 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 NUGGCQ68CJ6 796 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 SLFN12LQ6IEE8 588 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 KLHL17Q6TDP4 642 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 CEP57L1Q8IYX8 460 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 SH2D3CQ8N5H7 860 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 NGEFQ8N5V2 710 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 GLB1L3Q8NCI6 653 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 MSANTD4Q8NCY6 345 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 APPL2Q8NEU8 664 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 IL17DQ8TAD2 202 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 BRIX1Q8TDN6 353 aaKnown RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 CREB3L4Q8TEY5 395 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZNF483Q8TF39 744 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZNF384Q8TF68 577 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 AFG1LQ8WV93 481 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 CCDC47Q96A33 483 aaKnown RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 NAF1Q96HR8 494 aaKnown RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 CLPTM1LQ96KA5 538 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 FOXB1Q99853 325 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 DDX23Q9BUQ8 820 aaKnown RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 TRIM54Q9BYV2 358 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 MAGEB5Q9BZ81 275 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 DPH1Q9BZG8 443 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 GPR63Q9BZJ6 419 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 XPO4Q9C0E2 1151 aaKnown RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 PRDM13Q9H4Q3 707 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 WDCPQ9H6R7 721 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 MMRN2Q9H8L6 949 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 SEPSECSQ9HD40 501 aaKnown RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 DIAPH3Q9NSV4 1193 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 SACM1LQ9NTJ5 587 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 RBM12Q9NTZ6 932 aaKnown RBP3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 TDP1Q9NUW8 608 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 RIC8BQ9NVN3 520 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 CALCOCO1Q9P1Z2 691 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 PI4KBQ9UBF8 816 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ABCF2Q9UG63 623 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZFP69BQ9UJL9 534 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 TBX20Q9UMR3 447 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 SYNPO2Q9UMS6 1093 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 OAZ3Q9UMX2 235 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZNF711Q9Y462 761 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 PCDHA3Q9Y5H8 950 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 PCDHA13Q9Y5I0 950 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 DMRT1Q9Y5R6 373 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 MYPNQ86TC9 1320 aa3.39□□□□□ -1.87
TRAPPC4-207ENST00000526141 PIP5K1BO14986 540 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 HTATSF1O43719 755 aaKnown RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 NRP2O60462 931 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 FSBPO95073 299 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 TK1P04183 234 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 ADRB2P07550 413 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 MMEP08473 750 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 ACADMP11310 421 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 GYS1P13807 737 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 PORP16435 677 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 CCR9P51686 369 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 COPAP53621 1224 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 SEC24CP53992 1094 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 SESN2P58004 480 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 SLC6A3Q01959 620 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 HHEXQ03014 270 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 PPP2R5CQ13362 524 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 ACVR2BQ13705 512 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 EIF4A2Q14240 407 aaKnown RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 RAB39AQ14964 217 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 NOMO1Q15155 1222 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 RASA2Q15283 850 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 KHDC1Q4VXA5 237 aaKnown RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 SLC44A4Q53GD3 710 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 KHDC1LQ5JSQ8 128 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 RPUSD3Q6P087 351 aaKnown RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 NFRKBQ6P4R8 1299 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 FAM180AQ6UWF9 173 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 BBS12Q6ZW61 710 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 TMTC3Q6ZXV5 915 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 RNF44Q7L0R7 432 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 GALNTL5Q7Z4T8 443 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 PRPF39Q86UA1 669 aaKnown RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 PROSER1Q86XN7 944 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 ERC1Q8IUD2 1116 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 RHOT1Q8IXI2 618 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 ARL6IP6Q8N6S5 226 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 TEX9Q8N6V9 391 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 STPG3Q8N7X2 389 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 GLIS1Q8NBF1 620 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 CCDC150Q8NCX0 1101 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms