RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 IRF7Q92985 503 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 E2F7Q96AV8 911 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 TRMT2BQ96GJ1 504 aaKnown RBP18.13■□□□□ 0.49
CCS-203ENST00000526058 MYRFLQ96LU7 910 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 B3GNT5Q9BYG0 378 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 MAN1B1Q9UKM7 699 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 SIT1Q9Y3P8 196 aa18.13■□□□□ 0.49
CCS-203ENST00000526058 MTF2Q9Y483 593 aaPredicted RBP18.13■□□□□ 0.49
CCS-203ENST00000526058 USP34Q70CQ2 3546 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 VPS13AQ96RL7 3174 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 WDR87Q6ZQQ6 2873 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 KANSL1LA0AUZ9 987 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 SHISA7A6NL88 538 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 CLDN5O00501 218 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 ZNF263O14978 683 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 CD44P16070 742 aaKnown RBP18.12■□□□□ 0.49
CCS-203ENST00000526058 WEE1P30291 646 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 ASPAP45381 313 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 CACNA2D1P54289 1103 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 ENPEPQ07075 957 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 CMTM8Q8IZV2 173 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 DTWD2Q8NBA8 298 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 PJA1Q8NG27 643 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 TAF4BQ92750 862 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 DNASE1L2Q92874 299 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 SPATA17Q96L03 361 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 PHOX2BQ99453 314 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 TSG101Q99816 390 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 ZNF518BQ9C0D4 1074 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 APOBEC3GQ9HC16 384 aaKnown RBP18.12■□□□□ 0.49
CCS-203ENST00000526058 TMEM30AQ9NV96 361 aa18.12■□□□□ 0.49
CCS-203ENST00000526058 F8VP50 259 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 ARNTLO00327 626 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 DPYSL4O14531 572 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 EPB41P11171 864 aaKnown RBP18.11■□□□□ 0.49
CCS-203ENST00000526058 P4HA1P13674 534 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 GLULP15104 373 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 BMP6P22004 513 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 USP46P62068 366 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 FCHO2Q0JRZ9 810 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 ORC1Q13415 861 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 ZC3H3Q8IXZ2 948 aaKnown RBP18.11■□□□□ 0.49
CCS-203ENST00000526058 YAF2Q8IY57 180 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 MRPS31Q92665 395 aaKnown RBP18.11■□□□□ 0.49
CCS-203ENST00000526058 ZFYVE19Q96K21 471 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 TMEM8AQ9HCN3 771 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 FAM86C1Q9NVL1 165 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 DLGAP2Q9P1A6 1054 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 UXTQ9UBK9 157 aaPredicted RBP18.11■□□□□ 0.49
CCS-203ENST00000526058 HMGXB4Q9UGU5 601 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 CCL26Q9Y258 94 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 MYH10P35580 1976 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 CACNA1IQ9P0X4 2223 aa18.11■□□□□ 0.49
CCS-203ENST00000526058 ZFHX2Q9C0A1 2572 aaPredicted RBP18.1■□□□□ 0.49
CCS-203ENST00000526058 KIF26AQ9ULI4 1882 aaPredicted RBP18.1■□□□□ 0.49
CCS-203ENST00000526058 TRIM66O15016 1216 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 CHADO15335 359 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 ANXA13P27216 316 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 NDST1P52848 882 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 UBXN2BQ14CS0 331 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 DENND5BQ6ZUT9 1274 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 PAQR9Q6ZVX9 377 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 ACOT1Q86TX2 421 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 MON1AQ86VX9 555 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 C8orf48Q96LL4 319 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 GTPBP4Q9BZE4 634 aaKnown RBP18.1■□□□□ 0.49
CCS-203ENST00000526058 LTB4R2Q9NPC1 389 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 TRPV5Q9NQA5 729 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 OBP2AQ9NY56 170 aa18.1■□□□□ 0.49
CCS-203ENST00000526058 FAM170BA6NMN3 283 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 BIN1O00499 593 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 CCNE1P24864 410 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 DDX6P26196 483 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCS-203ENST00000526058 GTF2H1P32780 548 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 AVPR1AP37288 418 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 ANP32AP39687 249 aaKnown RBP18.09■□□□□ 0.49
CCS-203ENST00000526058 NOP14P78316 857 aaKnown RBP18.09■□□□□ 0.49
CCS-203ENST00000526058 FKBP3Q00688 224 aaKnown RBP18.09■□□□□ 0.49
CCS-203ENST00000526058 LRRC63Q05C16 580 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 KRT39Q6A163 491 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 CELF5Q8N6W0 485 aaKnown RBP18.09■□□□□ 0.49
CCS-203ENST00000526058 SEMA4DQ92854 862 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 ATOH1Q92858 354 aaPredicted RBP18.09■□□□□ 0.49
CCS-203ENST00000526058 USP13Q92995 863 aaPredicted RBP18.09■□□□□ 0.49
CCS-203ENST00000526058 DHTKD1Q96HY7 919 aaPredicted RBP18.09■□□□□ 0.49
CCS-203ENST00000526058 TNIP3Q96KP6 325 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 SLC22A12Q96S37 553 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 CYP2S1Q96SQ9 504 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 BCO2Q9BYV7 579 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 IMPG2Q9BZV3 1241 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 ELOVL4Q9GZR5 314 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 TRPC7Q9HCX4 862 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 ZMYM5Q9UJ78 669 aa18.09■□□□□ 0.49
CCS-203ENST00000526058 PPP1R3GB7ZBB8 358 aa18.08■□□□□ 0.48
CCS-203ENST00000526058 PSMA7O14818 248 aa18.08■□□□□ 0.48
CCS-203ENST00000526058 SLC16A3O15427 465 aaKnown RBP18.08■□□□□ 0.48
CCS-203ENST00000526058 TARSP26639 723 aaKnown RBP18.08■□□□□ 0.48
CCS-203ENST00000526058 UBE2HP62256 183 aa18.08■□□□□ 0.48
CCS-203ENST00000526058 STIM1Q13586 685 aa18.08■□□□□ 0.48
CCS-203ENST00000526058 MORC3Q14149 939 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms