RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 UVSSAQ2YD98 709 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 PKDCCQ504Y2 493 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 KIAA1841Q6NSI8 718 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 WDR59Q6PJI9 974 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 ANKS3Q6ZW76 656 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 DPH6Q7L8W6 267 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 TMC6Q7Z403 805 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 IRF2BP2Q7Z5L9 587 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 USP37Q86T82 979 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 NOP9Q86U38 636 aaKnown RBP6.9□□□□□ -1.3
CD44-214ENST00000525211 CRYBG2Q8N1P7 616 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 WDTC1Q8N5D0 677 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 SPC24Q8NBT2 197 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 B3GALNT2Q8NCR0 500 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 PRR7Q8TB68 274 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 UBA3Q8TBC4 463 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 LRRN4Q8WUT4 740 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 PPM1EQ8WY54 764 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 NDRG1Q92597 394 aaKnown RBP6.9□□□□□ -1.3
CD44-214ENST00000525211 PCED1BQ96HM7 432 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 KCNK16Q96T55 309 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 PCDHB18PQ96TA0 734 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 SMOQ99835 787 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 ACBD6Q9BR61 282 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 SYT11Q9BT88 431 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 SNX25Q9H3E2 840 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 HCFC1R1Q9NWW0 138 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 CLEC1BQ9P126 229 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 FNIP2Q9P278 1114 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 PUF60Q9UHX1 559 aaKnown RBP6.9□□□□□ -1.3
CD44-214ENST00000525211 NOCTQ9UK39 431 aaKnown RBP6.9□□□□□ -1.3
CD44-214ENST00000525211 CDH9Q9ULB4 789 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 HCFC2Q9Y5Z7 792 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 IRAK3Q9Y616 596 aa6.9□□□□□ -1.3
CD44-214ENST00000525211 XIRP2A4UGR9 3374 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 TMEM265A0A087WTH1 108 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 OR6C75A6NL08 312 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 O00370 1275 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 PIK3R2O00459 728 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 MICAL2O94851 1124 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 MMEP08473 750 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 FAM163BP0C2L3 166 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 HAPLN1P10915 354 aaPredicted RBP6.89□□□□□ -1.31
CD44-214ENST00000525211 CPB1P15086 417 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 POU3F3P20264 500 aaPredicted RBP6.89□□□□□ -1.31
CD44-214ENST00000525211 SOX5P35711 763 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 USP8P40818 1118 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 ABL2P42684 1182 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 LHX1P48742 406 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 MFAP3P55082 362 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 TPM4P67936 248 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 FMO1Q01740 532 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 ARID5AQ03989 594 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 GPR17Q13304 367 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 ADAM15Q13444 863 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 CLUL1Q15846 466 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 GOLGA7BQ2TAP0 167 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 FILIP1LQ4L180 1135 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 TAF3Q5VWG9 929 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 HGSNATQ68CP4 663 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 ZNF280DQ6N043 979 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 SYCE2Q6PIF2 218 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 BLOC1S3Q6QNY0 202 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 ZNF571Q7Z3V5 609 aaPredicted RBP6.89□□□□□ -1.31
CD44-214ENST00000525211 FAM35AQ86V20 835 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 RETREG3Q86VR2 466 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 METTL23Q86XA0 190 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 PASD1Q8IV76 773 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 TMEM86AQ8N2M4 240 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 TC2NQ8N9U0 490 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 ANKRD20A12PQ8NF67 263 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 ST13P5Q8NFI4 369 aaPredicted RBP6.89□□□□□ -1.31
CD44-214ENST00000525211 NEK11Q8NG66 645 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 MYCBPAPQ8TBZ2 947 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 SLC2A14Q8TDB8 520 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 GIPC2Q8TF65 315 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 ZNF707Q96C28 371 aaPredicted RBP6.89□□□□□ -1.31
CD44-214ENST00000525211 CYFIP2Q96F07 1278 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 TMEM176AQ96HP8 235 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 HEXIM2Q96MH2 286 aaKnown RBP6.89□□□□□ -1.31
CD44-214ENST00000525211 CHP1Q99653 195 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 NT5C1AQ9BXI3 368 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 STK33Q9BYT3 514 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 IMPG2Q9BZV3 1241 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 LMAN2LQ9H0V9 348 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 NSUN3Q9H649 340 aaKnown RBP6.89□□□□□ -1.31
CD44-214ENST00000525211 TLE6Q9H808 572 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 ZNF334Q9HCZ1 680 aaPredicted RBP6.89□□□□□ -1.31
CD44-214ENST00000525211 ABI2Q9NYB9 513 aaPredicted RBP6.89□□□□□ -1.31
CD44-214ENST00000525211 TAS2R14Q9NYV8 317 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 CEP72Q9P209 647 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 FBXW11Q9UKB1 542 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 CAPN11Q9UMQ6 739 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 R3HCC1Q9Y3T6 440 aaKnown RBP6.89□□□□□ -1.31
CD44-214ENST00000525211 YIPF1Q9Y548 306 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 NOTCH4Q99466 2003 aa6.89□□□□□ -1.31
CD44-214ENST00000525211 UNC80Q8N2C7 3258 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 PTPRDP23468 1912 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 ITIH6Q6UXX5 1313 aa6.88□□□□□ -1.31
CD44-214ENST00000525211 GOLGA6L3A6NEY3 463 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms