RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 KCTD10Q9H3F6 313 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 VRTNQ9H8Y1 702 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 GTSE1Q9NYZ3 720 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 CCL26Q9Y258 94 aa10.1□□□□□ -0.79
SF3B2-204ENST00000525207 MYH10P35580 1976 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 LRRIQ3A6PVS8 624 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-204ENST00000525207 CST3P01034 146 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-204ENST00000525207 ATICP31939 592 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 SYKP43405 635 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 CCR3P51677 355 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 NDUFA8P51970 172 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 KPNA1P52294 538 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-204ENST00000525207 MYL6P60660 151 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 CLDN10P78369 228 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 CSTF1Q05048 431 aaKnown RBP10.09□□□□□ -0.79
SF3B2-204ENST00000525207 FAM160A1Q05DH4 1040 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 TNK2Q07912 1038 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 PSMD2Q13200 908 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 LRRC32Q14392 662 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 GAS6Q14393 721 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 ZNF268Q14587 947 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-204ENST00000525207 ZNF77Q15935 545 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 WDR72Q3MJ13 1102 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 MDH1BQ5I0G3 518 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 TXNDC8Q6A555 127 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 MAMSTRQ6ZN01 415 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 MON1AQ86VX9 555 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 SCN4BQ8IWT1 228 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 MYCBPAPQ8TBZ2 947 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 PARD3BQ8TEW8 1205 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 SYAP1Q96A49 352 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-204ENST00000525207 SPATA17Q96L03 361 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 CEP295NLQ96MC4 621 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 HPS4Q9NQG7 708 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 TDP1Q9NUW8 608 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 DMAC2Q9NW81 257 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 ATP6V1DQ9Y5K8 247 aa10.09□□□□□ -0.79
SF3B2-204ENST00000525207 ZNF292O60281 2723 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 A0A1W2PQ27 194 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 A0A1W2PQ64 194 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 A0A1W2PQD8 194 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 PDXKO00764 312 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 TRIM66O15016 1216 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 LILRB5O75023 590 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 RHOBTB3O94955 611 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 NR3C1P04150 777 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 RPN1P04843 607 aaKnown RBP10.08□□□□□ -0.8
SF3B2-204ENST00000525207 PDGFRBP09619 1106 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 FAM163BP0C2L3 166 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 BDNFP23560 247 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 AP3M2P53677 418 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 CYP27A1Q02318 531 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 BIRC3Q13489 604 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 TRPC3Q13507 836 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 CCINQ13939 588 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 MTF1Q14872 753 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 ZNF699Q32M78 642 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 ITPRIPL2Q3MIP1 535 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 TSSK4Q6SA08 328 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 Q6ZS52 159 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 FSIP1Q8NA03 581 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 SUMF1Q8NBK3 374 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 B3GALNT2Q8NCR0 500 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 OR6B3Q8NGW1 331 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 TTC8Q8TAM2 541 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 CHFRQ96EP1 664 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 FAM83CQ9BQN1 747 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 TTLL2Q9BWV7 592 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 FAM126AQ9BYI3 521 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-204ENST00000525207 ELOVL4Q9GZR5 314 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 SCAND2PQ9GZW5 306 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-204ENST00000525207 EPC1Q9H2F5 836 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 SNX25Q9H3E2 840 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 GOLPH3LQ9H4A5 285 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 DPEP3Q9H4B8 488 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 SMYD3Q9H7B4 428 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 LMAN1LQ9HAT1 526 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 TRPC7Q9HCX4 862 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 RBM12Q9NTZ6 932 aaKnown RBP10.08□□□□□ -0.8
SF3B2-204ENST00000525207 TMEM30AQ9NV96 361 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 THG1LQ9NWX6 298 aaKnown RBP10.08□□□□□ -0.8
SF3B2-204ENST00000525207 ZSCAN32Q9NX65 697 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 MAGEC2Q9UBF1 373 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-204ENST00000525207 CEP250Q9BV73 2442 aa10.08□□□□□ -0.8
SF3B2-204ENST00000525207 DCHS1Q96JQ0 3298 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 TRAV19A0A0A6YYK7 116 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 C2orf78A6NCI8 922 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 F8VP50 259 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 PHACTR2O75167 634 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 PAPSS2O95340 614 aaPredicted RBP10.07□□□□□ -0.8
SF3B2-204ENST00000525207 VNN1O95497 513 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 C4BPAP04003 597 aaKnown RBP10.07□□□□□ -0.8
SF3B2-204ENST00000525207 CKMP06732 381 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 ARSAP15289 507 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 ANXA13P27216 316 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 GRIK1P39086 918 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 CACNA2D1P54289 1103 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 USP46P62068 366 aa10.07□□□□□ -0.8
SF3B2-204ENST00000525207 NOP14P78316 857 aaKnown RBP10.07□□□□□ -0.8
SF3B2-204ENST00000525207 SATB1Q01826 763 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms