RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 SLC22A12Q96S37 553 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 CYP2S1Q96SQ9 504 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 FAM83CQ9BQN1 747 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 TMEM30AQ9NV96 361 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 SPATA6Q9NWH7 488 aaPredicted RBP13.41□□□□□ -0.26
SMCO4-202ENST00000525141 GTSE1Q9NYZ3 720 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 MAN1B1Q9UKM7 699 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 CDH9Q9ULB4 789 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 NDRG2Q9UN36 371 aaKnown RBP13.41□□□□□ -0.26
SMCO4-202ENST00000525141 MAPK8IP1Q9UQF2 711 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 PIAS3Q9Y6X2 628 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 ZNF292O60281 2723 aa13.41□□□□□ -0.26
SMCO4-202ENST00000525141 OTOL1A6NHN0 477 aaPredicted RBP13.4□□□□□ -0.26
SMCO4-202ENST00000525141 LRRIQ3A6PVS8 624 aaPredicted RBP13.4□□□□□ -0.26
SMCO4-202ENST00000525141 TACC1O75410 805 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 CSH1P0DML2 217 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 CSH2P0DML3 217 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 TDGF1P13385 188 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 CDC25CP30307 473 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 HOXC13P31276 330 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 PSMC1P62191 440 aaKnown RBP13.4□□□□□ -0.26
SMCO4-202ENST00000525141 CSTF1Q05048 431 aaKnown RBP13.4□□□□□ -0.26
SMCO4-202ENST00000525141 MORC3Q14149 939 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 CAMK4Q16566 473 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 ARHGAP15Q53QZ3 475 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 TSSK4Q6SA08 328 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 MAMSTRQ6ZN01 415 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 ADSSL1Q8N142 457 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 BPIFB1Q8TDL5 484 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 CHFRQ96EP1 664 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 MMS19Q96T76 1030 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 SYT15Q9BQS2 421 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 CLSTN2Q9H4D0 955 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 GKN1Q9NS71 199 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 MAGEC2Q9UBF1 373 aaPredicted RBP13.4□□□□□ -0.26
SMCO4-202ENST00000525141 FBXO4Q9UKT5 387 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 MAGED2Q9UNF1 606 aaPredicted RBP13.4□□□□□ -0.26
SMCO4-202ENST00000525141 GPR179Q6PRD1 2367 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 ANAPC1Q9H1A4 1944 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 OBSL1O75147 1896 aa13.4□□□□□ -0.26
SMCO4-202ENST00000525141 NUP210Q8TEM1 1887 aaPredicted RBP13.4□□□□□ -0.26
SMCO4-202ENST00000525141 SPTBN4Q9H254 2564 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 PATJQ8NI35 1801 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 GVINP1Q7Z2Y8 2422 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 MAPK13O15264 365 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 EXOC3O60645 756 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 STAU1O95793 577 aaKnown RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 NR3C1P04150 777 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 BDNFP23560 247 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 RPL13P26373 211 aaKnown RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 PCSK1P29120 753 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 MAGEA11P43364 429 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 CACNA2D1P54289 1103 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 CDH8P55286 799 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 USP46P62068 366 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 RPL10AP62906 217 aaKnown RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 ZXDBP98169 803 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 STIM1Q13586 685 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 EDRF1Q3B7T1 1238 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 ZNF528Q3MIS6 628 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 WDR72Q3MJ13 1102 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 ZCWPW2Q504Y3 356 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 TDRD10Q5VZ19 366 aaKnown RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 SPATA2LQ8IUW3 424 aaPredicted RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 SCN4BQ8IWT1 228 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 SMYD4Q8IYR2 804 aaPredicted RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 CELF5Q8N6W0 485 aaKnown RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 SUMF1Q8NBK3 374 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 MYCBPAPQ8TBZ2 947 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 MYLPFQ96A32 169 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 TRMT2BQ96GJ1 504 aaKnown RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 PCED1BQ96HM7 432 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 DHTKD1Q96HY7 919 aaPredicted RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 FUBP3Q96I24 572 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 FNBP1Q96RU3 617 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 SDCBP2Q9H190 292 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 CHRDQ9H2X0 955 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 DPEP3Q9H4B8 488 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 HPS4Q9NQG7 708 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 C2orf42Q9NWW7 574 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 GCNT4Q9P109 453 aa13.39□□□□□ -0.27
SMCO4-202ENST00000525141 MRPS17Q9Y2R5 130 aaKnown RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 KIF26AQ9ULI4 1882 aaPredicted RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 ZNF638Q14966 1978 aaKnown RBP13.39□□□□□ -0.27
SMCO4-202ENST00000525141 OTOGLQ3ZCN5 2332 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 SOBPA7XYQ1 873 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 SPECC1L-ADORA2AF8WAN1 911 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 DPYSL4O14531 572 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 NCAM2O15394 837 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 LAMTOR5O43504 91 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 MBD3O95983 291 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 PTPN1P18031 435 aaKnown RBP13.38□□□□□ -0.27
SMCO4-202ENST00000525141 BMP6P22004 513 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 MAGEA9P43362 315 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 MCCD1P59942 119 aaPredicted RBP13.38□□□□□ -0.27
SMCO4-202ENST00000525141 TAF12Q16514 161 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 ARHGAP29Q52LW3 1261 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 ISM2Q6H9L7 571 aa13.38□□□□□ -0.27
SMCO4-202ENST00000525141 FOXR2Q6PJQ5 311 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms