RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 MAB21L3Q8N8X9 362 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 BPIFB1Q8TDL5 484 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 CSGALNACT1Q8TDX6 532 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 CLDN23Q96B33 292 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 ELMO3Q96BJ8 720 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 PCED1BQ96HM7 432 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 SPATA17Q96L03 361 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 BCO2Q9BYV7 579 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 SDCBP2Q9H190 292 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 MRPS17Q9Y2R5 130 aaKnown RBP11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 PIAS3Q9Y6X2 628 aa11.92□□□□□ -0.5
TRAPPC4-204ENST00000524797 PIEZO1Q92508 2521 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 A8MXQ7 604 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 AKAP3O75969 853 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 CLSTN1O94985 981 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 HLA-DRAP01903 254 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 RPL13P26373 211 aaKnown RBP11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 ANXA13P27216 316 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 VAMP7P51809 220 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 MLLT6P55198 1093 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 CDH8P55286 799 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 FAM160A1Q05DH4 1040 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 FZD5Q13467 585 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 SCARA5Q6ZMJ2 495 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 SV2AQ7L0J3 742 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 FRMD5Q7Z6J6 570 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 FAM186BQ8IYM0 893 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 SMYD4Q8IYR2 804 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 CELF5Q8N6W0 485 aaKnown RBP11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 CEP295NLQ96MC4 621 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 RMND1Q9NWS8 449 aa11.91□□□□□ -0.5
TRAPPC4-204ENST00000524797 MYO16Q9Y6X6 1858 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 IKBKBO14920 756 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 TRIM66O15016 1216 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 TRIM49P0CI25 452 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 TRIM49CP0CI26 452 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 GRIK1P39086 918 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 PIK3CAP42336 1068 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 ENPEPQ07075 957 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 SGSM1Q2NKQ1 1148 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 EDRF1Q3B7T1 1238 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 INTS8Q75QN2 995 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 C1orf210Q8IVY1 113 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 B3GALNT2Q8NCR0 500 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 FAM3CQ92520 227 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 TAF4BQ92750 862 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 USP13Q92995 863 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 MSANTD3Q96H12 275 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 ZFYVE19Q96K21 471 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 C8orf48Q96LL4 319 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 TIGD1Q96MW7 591 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 B3GNT5Q9BYG0 378 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 ZNF518BQ9C0D4 1074 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 KIF9Q9HAQ2 790 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 SPATA6Q9NWH7 488 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 NDRG2Q9UN36 371 aaKnown RBP11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 F5P12259 2224 aa11.9□□□□□ -0.5
TRAPPC4-204ENST00000524797 NCAM2O15394 837 aa11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 ASS1P00966 412 aaKnown RBP11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 SP9P0CG40 484 aa11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 KRT13P13646 458 aa11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 PSMC2P35998 433 aaKnown RBP11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 AVPR1AP37288 418 aa11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 RPS9P46781 194 aaKnown RBP11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 PLCB2Q00722 1185 aa11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 ADAM9Q13443 819 aa11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 ZNF268Q14587 947 aaPredicted RBP11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 ZNF658Q5TYW1 1059 aaPredicted RBP11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 MAML2Q8IZL2 1156 aaPredicted RBP11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 ELOVL4Q9GZR5 314 aa11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 C8orf33Q9H7E9 229 aaPredicted RBP11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 CCL26Q9Y258 94 aa11.9□□□□□ -0.51
TRAPPC4-204ENST00000524797 TRAV19A0A0A6YYK7 116 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 F8VP50 259 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 CLDN5O00501 218 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 GFRA3O60609 400 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 SMC2O95347 1197 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 P4HA1P13674 534 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 CCNE1P24864 410 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 PRCPP42785 496 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 SOX9P48436 509 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 KPNA1P52294 538 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 MCCD1P59942 119 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 USP46P62068 366 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 PPP3CAQ08209 521 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 COBLL1Q53SF7 1204 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 SPOPLQ6IQ16 392 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 DENND5BQ6ZUT9 1274 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 TTC8Q8TAM2 541 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 GSDMAQ96QA5 445 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 TTLL2Q9BWV7 592 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 TRPC7Q9HCX4 862 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 TDP1Q9NUW8 608 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 TMEM30AQ9NV96 361 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 THG1LQ9NWX6 298 aaKnown RBP11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 GCNT4Q9P109 453 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 ATP8B3O60423 1300 aa11.89□□□□□ -0.51
TRAPPC4-204ENST00000524797 KIAA1549LQ6ZVL6 1849 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms