RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 VPS11Q9H270 941 aa8.71□□□□□ -1.01
CHD7-202ENST00000524602 STK38LQ9Y2H1 464 aa8.71□□□□□ -1.01
CHD7-202ENST00000524602 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 B4GALT4O60513 344 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 SPAG6O75602 509 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 FARP2O94887 1054 aaPredicted RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 IFNB1P01574 187 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 TNNC2P02585 160 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 TROVE2P10155 538 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHD7-202ENST00000524602 KRT4P19013 534 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 KDELR1P24390 212 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 STAT5BP51692 787 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 OTUD4Q01804 1114 aaKnown RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 TXNRD3NBQ6F5E7 133 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 PDIK1LQ8N165 341 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 ACTL9Q8TC94 416 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 ZNF75CPQ92670 426 aaPredicted RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 ANKRD36BP1Q96IX9 119 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 LNPEPQ9UIQ6 1025 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 GRID1Q9ULK0 1009 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHD7-202ENST00000524602 CLUHO75153 1309 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 A0A0G2JMZ2 1700 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 WDR90Q96KV7 1748 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 SPDYE16A6NNV3 312 aaPredicted RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 APOC4-APOC2K7ER74 178 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 LRCH4O75427 683 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 APOC2P02655 101 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 UBA1P22314 1058 aaKnown RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 TNFSF9P41273 254 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 HIRAP54198 1017 aaPredicted RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 NAA25Q14CX7 972 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 SLC1A5Q15758 541 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 SEPT7Q16181 437 aaKnown RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 MAPK6Q16659 721 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 ACCSLQ4AC99 568 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 LVRNQ6Q4G3 990 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 C4orf33Q8N1A6 199 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 PRPF31Q8WWY3 499 aaKnown RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 PCYT2Q99447 389 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 PAFAH2Q99487 392 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 TCHPQ9BT92 498 aa8.71□□□□□ -1.02
CHD7-202ENST00000524602 MAK16Q9BXY0 300 aaKnown RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 FRMD8Q9BZ67 464 aaPredicted RBP8.71□□□□□ -1.02
CHD7-202ENST00000524602 ANK1P16157 1881 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 ABLIM1O14639 778 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 CST8O60676 142 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 IL18RAPO95256 599 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 PRKCBP05771 671 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 HARSP12081 509 aaKnown RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 PROZP22891 400 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 EDNRBP24530 442 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 STIP1P31948 543 aaKnown RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 RFC1P35251 1148 aaPredicted RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 CLNS1AP54105 237 aaKnown RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 NOL9Q5SY16 702 aaKnown RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 TSHZ1Q6ZSZ6 1077 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 C3orf62Q6ZUJ4 267 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 MZB1Q8WU39 189 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 TFAP2BQ92481 460 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 BCO2Q9BYV7 579 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 XYLT2Q9H1B5 865 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 FAM124BQ9H5Z6 455 aaPredicted RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 KIF9Q9HAQ2 790 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 L3MBTL1Q9Y468 752 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 LRRC37A2A6NM11 1700 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 IQANK1A0A1B0GTG1 560 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 IL1BP01584 269 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 HOXC6P09630 235 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 GABRB2P47870 512 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 PTPN20Q4JDL3 420 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 WASHC2DQ5SRD0 308 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 CYP4A22Q5TCH4 519 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 MPZL3Q6UWV2 235 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 OTOAQ7RTW8 1153 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 RHPN2Q8IUC4 686 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 PALM2Q8IXS6 379 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 GPC2Q8N158 579 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 BANPQ8N9N5 519 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 CMASQ8NFW8 434 aaPredicted RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 SEPT1Q8WYJ6 367 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 HAUS1Q96CS2 278 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 CYTH2Q99418 400 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 TLE6Q9H808 572 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 RSAD1Q9HA92 442 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 SLCO1B3Q9NPD5 702 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 TRIM33Q9UPN9 1127 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 A0A1W2PPM1 405 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 LIN7AO14910 233 aaPredicted RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 PPP1R12AO14974 1030 aaPredicted RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 MCF2LO15068 1137 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 LUC7L3O95232 432 aaKnown RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 TGDSO95455 350 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 RPL22P35268 128 aaKnown RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 PCK1P35558 622 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 LAMTOR4Q0VGL1 99 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 PRKG1Q13976 671 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 TFDP1Q14186 410 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 SEZ6Q53EL9 994 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 SH3D19Q5HYK7 790 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms