RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 LRRC4Q9HBW1 653 aa10.5□□□□□ -0.73
VPS13B-212ENST00000524330 EPB41L5Q9HCM4 733 aa10.5□□□□□ -0.73
VPS13B-212ENST00000524330 GDF3Q9NR23 364 aa10.5□□□□□ -0.73
VPS13B-212ENST00000524330 FAM49BQ9NUQ9 324 aa10.5□□□□□ -0.73
VPS13B-212ENST00000524330 TMEM51Q9NW97 253 aa10.5□□□□□ -0.73
VPS13B-212ENST00000524330 DDX43Q9NXZ2 648 aaKnown RBP10.5□□□□□ -0.73
VPS13B-212ENST00000524330 SMARCAL1Q9NZC9 954 aa10.5□□□□□ -0.73
VPS13B-212ENST00000524330 CHORDC1Q9UHD1 332 aaPredicted RBP10.5□□□□□ -0.73
VPS13B-212ENST00000524330 EFR3BQ9Y2G0 817 aa10.5□□□□□ -0.73
VPS13B-212ENST00000524330 INPP5FQ9Y2H2 1132 aa10.5□□□□□ -0.73
VPS13B-212ENST00000524330 PCDHB7Q9Y5E2 793 aa10.5□□□□□ -0.73
VPS13B-212ENST00000524330 TRIP11Q15643 1979 aa10.5□□□□□ -0.73
VPS13B-212ENST00000524330 UTRNP46939 3433 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 CARNS1A5YM72 827 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 GABRDO14764 452 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 RAD51CO43502 376 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 PRPSAP2O60256 369 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 GLI1P08151 1106 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 FAM200BP0CF97 657 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 PDGFRAP16234 1089 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 TYMPP19971 482 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 IBSPP21815 317 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-212ENST00000524330 PTPN7P35236 360 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 GJC1P36383 396 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 PLA2G4AP47712 749 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 CDK7P50613 346 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 CLCNKBP51801 687 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 ZNF143P52747 638 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-212ENST00000524330 FAM189BP81408 668 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 CAP1Q01518 475 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 PLCB3Q01970 1234 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 SOX4Q06945 474 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-212ENST00000524330 CYP1B1Q16678 543 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 UPP1Q16831 310 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 BOLA3Q53S33 107 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 C2CD6Q53TS8 623 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 NOMO2Q5JPE7 1267 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 BEND6Q5SZJ8 279 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-212ENST00000524330 DCAF12L1Q5VU92 463 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 SCARA3Q6AZY7 606 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 KRT222Q8N1A0 295 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 SIX6OS1Q8N1H7 587 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 C12orf50Q8NA57 414 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-212ENST00000524330 SH3TC2Q8TF17 1288 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 SLC35F5Q8WV83 523 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 KBTBD7Q8WVZ9 684 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 IFT81Q8WYA0 676 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 LPPQ93052 612 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 DEFB118Q96PH6 123 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 TBCBQ99426 244 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 SYT15Q9BQS2 421 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 MAK16Q9BXY0 300 aaKnown RBP10.49□□□□□ -0.73
VPS13B-212ENST00000524330 DUSP16Q9BY84 665 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 MRPL9Q9BYD2 267 aaKnown RBP10.49□□□□□ -0.73
VPS13B-212ENST00000524330 OSBPL8Q9BZF1 889 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 UBXN6Q9BZV1 441 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 DDX47Q9H0S4 455 aaKnown RBP10.49□□□□□ -0.73
VPS13B-212ENST00000524330 TSPYL1Q9H0U9 437 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 UNC93B1Q9H1C4 597 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 GOLGA2P5Q9HBQ8 144 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 PAK6Q9NQU5 681 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-212ENST00000524330 TMEM161AQ9NX61 479 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 MTRF1LQ9UGC7 380 aaKnown RBP10.49□□□□□ -0.73
VPS13B-212ENST00000524330 PCYOX1Q9UHG3 505 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 OGDHLQ9ULD0 1010 aa10.49□□□□□ -0.73
VPS13B-212ENST00000524330 CASTOR2A6NHX0 329 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 C9IYK1 514 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 E5RJQ4 531 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 DPYSL4O14531 572 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 SPTLC1O15269 473 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 ZNF189O75820 626 aaPredicted RBP10.48□□□□□ -0.73
VPS13B-212ENST00000524330 B3GAT3O94766 335 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 ECEL1O95672 775 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 POMCP01189 267 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 CYP11A1P05108 521 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 CCL5P13501 91 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 NPR3P17342 541 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 RFC1P35251 1148 aaPredicted RBP10.48□□□□□ -0.73
VPS13B-212ENST00000524330 COILP38432 576 aaPredicted RBP10.48□□□□□ -0.73
VPS13B-212ENST00000524330 AARSP49588 968 aaKnown RBP eCLIP10.48□□□□□ -0.73
VPS13B-212ENST00000524330 DRG2P55039 364 aaKnown RBP10.48□□□□□ -0.73
VPS13B-212ENST00000524330 RPL7AP62424 266 aaKnown RBP10.48□□□□□ -0.73
VPS13B-212ENST00000524330 SLC7A5Q01650 507 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 PDE4CQ08493 712 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 ELAVL2Q12926 359 aaKnown RBP10.48□□□□□ -0.73
VPS13B-212ENST00000524330 MTMR3Q13615 1198 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 TFDP2Q14188 446 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 PPP1R7Q15435 360 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 PKDCCQ504Y2 493 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 WSCD1Q658N2 575 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 CCDC137Q6PK04 289 aaKnown RBP10.48□□□□□ -0.73
VPS13B-212ENST00000524330 C4orf50Q6ZRC1 276 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 FAM183BPQ6ZVS7 135 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 ZNF598Q86UK7 904 aaKnown RBP10.48□□□□□ -0.73
VPS13B-212ENST00000524330 FAM126BQ8IXS8 530 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 C12orf29Q8N999 325 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 KCTD6Q8NC69 237 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 ATL2Q8NHH9 583 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 SLC2A14Q8TDB8 520 aa10.48□□□□□ -0.73
VPS13B-212ENST00000524330 KCTD13Q8WZ19 329 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms