RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 TTC7BQ86TV6 843 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 CCNJLQ8IV13 435 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 KBTBD2Q8IY47 623 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 NIPA2Q8N8Q9 360 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 SLC44A1Q8WWI5 657 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 RSAD2Q8WXG1 361 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 ZNF516Q92618 1163 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 APBB2Q92870 758 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 C7orf26Q96N11 449 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 KLF6Q99612 283 aaPredicted RBP10.74□□□□□ -0.69
SPIDR-225ENST00000524141 ECSITQ9BQ95 431 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 ALG13Q9NP73 1137 aaKnown RBP10.74□□□□□ -0.69
SPIDR-225ENST00000524141 CNTN3Q9P232 1028 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 FEM1BQ9UK73 627 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 ZNRF3Q9ULT6 936 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 AGTPBP1Q9UPW5 1226 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 WASF2Q9Y6W5 498 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 CAPN14A8MX76 684 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 FKBP6O75344 327 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 C4BPAP04003 597 aaKnown RBP10.74□□□□□ -0.69
SPIDR-225ENST00000524141 CFHP08603 1231 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 TCF4P15884 667 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 ZNF200P98182 395 aaPredicted RBP10.74□□□□□ -0.69
SPIDR-225ENST00000524141 KRT76Q01546 638 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 ZNF252P-AS1Q0IIN9 211 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 VPS72Q15906 364 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 BBS9Q3SYG4 887 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 RASIP1Q5U651 963 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 WDR78Q5VTH9 848 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 ANKRD22Q5VYY1 191 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 TDRD10Q5VZ19 366 aaKnown RBP10.74□□□□□ -0.69
SPIDR-225ENST00000524141 ATG16L1Q676U5 607 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 ARHGAP22Q7Z5H3 698 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 MCF2L2Q86YR7 1114 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 MYLK4Q86YV6 388 aaPredicted RBP10.74□□□□□ -0.69
SPIDR-225ENST00000524141 NCSTNQ92542 709 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 PPP2R3CQ969Q6 453 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 PRR11Q96HE9 360 aaPredicted RBP10.74□□□□□ -0.69
SPIDR-225ENST00000524141 MCEEQ96PE7 176 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.74□□□□□ -0.69
SPIDR-225ENST00000524141 ARHGEF4Q9NR80 690 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 GINM1Q9NU53 330 aa10.74□□□□□ -0.69
SPIDR-225ENST00000524141 SPECC1L-ADORA2AF8WAN1 911 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 PLSCR1O15162 318 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 UBTFL6P0CB48 400 aaPredicted RBP10.73□□□□□ -0.69
SPIDR-225ENST00000524141 RTP1P59025 263 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 RIPOR1Q6ZS17 1223 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 ADGRG6Q86SQ4 1221 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 ST13P4Q8IZP2 240 aaPredicted RBP10.73□□□□□ -0.69
SPIDR-225ENST00000524141 RBM15BQ8NDT2 890 aaKnown RBP10.73□□□□□ -0.69
SPIDR-225ENST00000524141 RDM1Q8NG50 284 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 IL31RAQ8NI17 732 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 ACTL9Q8TC94 416 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 ACER1Q8TDN7 264 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 SPATA16Q9BXB7 569 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 C1orf21Q9H246 121 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 C12orf65Q9H3J6 166 aaKnown RBP10.73□□□□□ -0.69
SPIDR-225ENST00000524141 ARMCX1Q9P291 453 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 TAGLN3Q9UI15 199 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 CCPG1Q9ULG6 757 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 F8VP50 259 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 PDLIM1O00151 329 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 POLRMTO00411 1230 aaKnown RBP10.73□□□□□ -0.69
SPIDR-225ENST00000524141 COPEO14579 308 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 ICAM1P05362 532 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 ENO1P06733 434 aaKnown RBP10.73□□□□□ -0.69
SPIDR-225ENST00000524141 CDK7P50613 346 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 OTUD4Q01804 1114 aaKnown RBP10.73□□□□□ -0.69
SPIDR-225ENST00000524141 TMCO4Q5TGY1 634 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 AAGABQ6PD74 315 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 KYAT3Q6YP21 454 aaKnown RBP10.73□□□□□ -0.69
SPIDR-225ENST00000524141 ULK2Q8IYT8 1036 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 MCPH1Q8NEM0 835 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 WDR83Q9BRX9 315 aaKnown RBP10.73□□□□□ -0.69
SPIDR-225ENST00000524141 DBNDD1Q9H9R9 158 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 XPO7Q9UIA9 1087 aaKnown RBP10.73□□□□□ -0.69
SPIDR-225ENST00000524141 PPME1Q9Y570 386 aa10.73□□□□□ -0.69
SPIDR-225ENST00000524141 FAM237BA0A1B0GVD1 139 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 FAM155BO75949 473 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 KRT7P08729 469 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 PYGBP11216 843 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 LIG4P49917 911 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 CC2D2BQ6DHV5 1058 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 SPOPLQ6IQ16 392 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 SH2D5Q6ZV89 423 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 BBS12Q6ZW61 710 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 TRMT1LQ7Z2T5 733 aaKnown RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 SDCCAG8Q86SQ7 713 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 ALYREFQ86V81 257 aaKnown RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 RAB3IL1Q8TBN0 382 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 ZNF606Q8WXB4 792 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 BSNDQ8WZ55 320 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 SERAC1Q96JX3 654 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 SRPK1Q96SB4 655 aaKnown RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 ZNF518BQ9C0D4 1074 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 PCMTD2Q9NV79 361 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 COL20A1Q9P218 1284 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 PPARGC1AQ9UBK2 798 aaKnown RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 KCNG1Q9UIX4 513 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 PLA2G4CQ9UP65 541 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms