RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TMEM206Q9H813 350 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 ABCB6Q9NP58 842 aa27.81■■■□□ 2.04
PVT1-219ENST00000523427 ANTXRLA6NF34 631 aa27.8■■■□□ 2.04
PVT1-219ENST00000523427 ATP2C2O75185 946 aa27.8■■■□□ 2.04
PVT1-219ENST00000523427 PPP1R37O75864 691 aa27.8■■■□□ 2.04
PVT1-219ENST00000523427 HDCP19113 662 aa27.8■■■□□ 2.04
PVT1-219ENST00000523427 SHC2P98077 582 aa27.8■■■□□ 2.04
PVT1-219ENST00000523427 TMEM86AQ8N2M4 240 aa27.8■■■□□ 2.04
PVT1-219ENST00000523427 FSIP1Q8NA03 581 aa27.8■■■□□ 2.04
PVT1-219ENST00000523427 MYRFLQ96LU7 910 aa27.8■■■□□ 2.04
PVT1-219ENST00000523427 OBSL1O75147 1896 aa27.79■■■□□ 2.04
PVT1-219ENST00000523427 BCLAF3A2AJT9 711 aaKnown RBP27.79■■■□□ 2.04
PVT1-219ENST00000523427 USP4Q13107 963 aa27.79■■■□□ 2.04
PVT1-219ENST00000523427 L1TD1Q5T7N2 865 aaKnown RBP27.79■■■□□ 2.04
PVT1-219ENST00000523427 LMBRD2Q68DH5 695 aaPredicted RBP27.79■■■□□ 2.04
PVT1-219ENST00000523427 ANO7Q6IWH7 933 aa27.79■■■□□ 2.04
PVT1-219ENST00000523427 CCDC33Q8N5R6 958 aa27.79■■■□□ 2.04
PVT1-219ENST00000523427 PKMYT1Q99640 499 aa27.79■■■□□ 2.04
PVT1-219ENST00000523427 PDE11AQ9HCR9 933 aa27.79■■■□□ 2.04
PVT1-219ENST00000523427 CCDC39Q9UFE4 941 aa27.79■■■□□ 2.04
PVT1-219ENST00000523427 EBF1Q9UH73 591 aa27.79■■■□□ 2.04
PVT1-219ENST00000523427 CIZ1Q9ULV3 898 aaPredicted RBP27.79■■■□□ 2.04
PVT1-219ENST00000523427 R3HCC1Q9Y3T6 440 aaKnown RBP27.79■■■□□ 2.04
PVT1-219ENST00000523427 ZFHX4Q86UP3 3567 aa27.79■■■□□ 2.04
PVT1-219ENST00000523427 MYMKA6NI61 221 aa27.78■■■□□ 2.04
PVT1-219ENST00000523427 IDEP14735 1019 aa27.78■■■□□ 2.04
PVT1-219ENST00000523427 PSMC1P62191 440 aaKnown RBP27.78■■■□□ 2.04
PVT1-219ENST00000523427 RBP5P82980 135 aa27.78■■■□□ 2.04
PVT1-219ENST00000523427 C8orf34Q49A92 452 aa27.78■■■□□ 2.04
PVT1-219ENST00000523427 USP39Q53GS9 565 aaKnown RBP27.78■■■□□ 2.04
PVT1-219ENST00000523427 LRRC52Q8N7C0 313 aa27.78■■■□□ 2.04
PVT1-219ENST00000523427 CBWD1Q9BRT8 395 aa27.78■■■□□ 2.04
PVT1-219ENST00000523427 MTMR12Q9C0I1 747 aa27.78■■■□□ 2.04
PVT1-219ENST00000523427 GCNT4Q9P109 453 aa27.78■■■□□ 2.04
PVT1-219ENST00000523427 ABCA7Q8IZY2 2146 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 SCAMP3O14828 347 aaKnown RBP27.77■■■□□ 2.04
PVT1-219ENST00000523427 TMEM191BP0C7N4 346 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 PCSK1P29120 753 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 LHX1P48742 406 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 CASP5P51878 434 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 FOXC1Q12948 553 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 RRAGBQ5VZM2 374 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 STRA6Q9BX79 667 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 GDAP2Q9NXN4 497 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 ITGA11Q9UKX5 1188 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 CLIC4Q9Y696 253 aa27.77■■■□□ 2.04
PVT1-219ENST00000523427 PATE3B3GLJ2 98 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 LDHAP00338 332 aaKnown RBP27.76■■■□□ 2.03
PVT1-219ENST00000523427 GAP43P17677 238 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 BCKDHBP21953 392 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 GRIK1P39086 918 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 SOWAHAQ2M3V2 549 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 CFAP221Q4G0U5 840 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 DAB2IPQ5VWQ8 1189 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 SV2BQ7L1I2 683 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 BRAPQ7Z569 592 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 USP33Q8TEY7 942 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 MAGEC2Q9UBF1 373 aaPredicted RBP27.76■■■□□ 2.03
PVT1-219ENST00000523427 SEL1LQ9UBV2 794 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 STK17AQ9UEE5 414 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 SIX4Q9UIU6 781 aa27.76■■■□□ 2.03
PVT1-219ENST00000523427 LNP1A1A4G5 178 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 VPS37CA5D8V6 355 aaPredicted RBP27.75■■■□□ 2.03
PVT1-219ENST00000523427 KHNYNO15037 678 aaKnown RBP27.75■■■□□ 2.03
PVT1-219ENST00000523427 NFATC1O95644 943 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 ABL1P00519 1130 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 PDGFRBP09619 1106 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 SPINK2P20155 84 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 BDNFP23560 247 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 LMO2P25791 158 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 DHPSP49366 369 aaPredicted RBP27.75■■■□□ 2.03
PVT1-219ENST00000523427 ZNF252P-AS1Q0IIN9 211 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 TOP6BLQ8N6T0 577 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 CXorf38Q8TB03 319 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 MYLPFQ96A32 169 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 DNAJC19Q96DA6 116 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 SYT15Q9BQS2 421 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 FGFBP2Q9BYJ0 223 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 PANK2Q9BZ23 570 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 ARHGAP26Q9UNA1 814 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 PCDHB13Q9Y5F0 798 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 FRYQ5TBA9 3013 aa27.75■■■□□ 2.03
PVT1-219ENST00000523427 LAMA1P25391 3075 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 C1QTNF9BB2RNN3 333 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 K7EQS6 105 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 GABRDO14764 452 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 PRPF6O94906 941 aaKnown RBP27.74■■■□□ 2.03
PVT1-219ENST00000523427 C1QTNF9P0C862 333 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 OPRD1P41143 372 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 CYP27A1Q02318 531 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 UAP1L1Q3KQV9 507 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 SH3PXD2AQ5TCZ1 1133 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 PMS2CLQ68D20 193 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 C4orf50Q6ZRC1 276 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 CYP2U1Q7Z449 544 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 FUBP3Q96I24 572 aaKnown RBP eCLIP27.74■■■□□ 2.03
PVT1-219ENST00000523427 CLIC6Q96NY7 704 aa27.74■■■□□ 2.03
PVT1-219ENST00000523427 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.74■■■□□ 2.03
PVT1-219ENST00000523427 LEFTY2O00292 366 aa27.73■■■□□ 2.03
PVT1-219ENST00000523427 PROS1P07225 676 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms