RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ZNF585BQ52M93 769 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 L1TD1Q5T7N2 865 aaKnown RBP3.52□□□□□ -1.85
PCM1-217ENST00000522998 DAB2IPQ5VWQ8 1189 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 ZNF549Q6P9A3 640 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 MTHFD1LQ6UB35 978 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 ZNF548Q8NEK5 533 aaPredicted RBP3.52□□□□□ -1.85
PCM1-217ENST00000522998 ATG4AQ8WYN0 398 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 KAT5Q92993 513 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 PUS7Q96PZ0 661 aaKnown RBP3.52□□□□□ -1.85
PCM1-217ENST00000522998 SIGLEC11Q96RL6 698 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 VRK1Q99986 396 aaPredicted RBP3.52□□□□□ -1.85
PCM1-217ENST00000522998 TFCP2L1Q9NZI6 479 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 HEY2Q9UBP5 337 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 TUBD1Q9UJT1 453 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 IPPQ9Y573 584 aa3.52□□□□□ -1.85
PCM1-217ENST00000522998 TCRBV5S1A1TA0A578 114 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 C4orf47A7E2U8 309 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 NT5C1B-RDH14C9J2C7 533 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 M0QYG6 137 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 HTRA2O43464 458 aaPredicted RBP3.51□□□□□ -1.85
PCM1-217ENST00000522998 RPLP2P05387 115 aaKnown RBP3.51□□□□□ -1.85
PCM1-217ENST00000522998 DLDP09622 509 aaKnown RBP3.51□□□□□ -1.85
PCM1-217ENST00000522998 SMARCA1P28370 1054 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 PIK3CGP48736 1102 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 ERVK-21P61565 698 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 SNAPC2Q13487 334 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 KIF22Q14807 665 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 FAM187BQ17R55 369 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 KHDC1Q4VXA5 237 aaKnown RBP3.51□□□□□ -1.85
PCM1-217ENST00000522998 TAF7LQ5H9L4 462 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 DGKKQ5KSL6 1271 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 LAYNQ6UX15 382 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 COLCA1Q6ZS62 124 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 USP37Q86T82 979 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 SLC15A3Q8IY34 581 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 ARFGAP1Q8N6T3 406 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 OSR1Q8TAX0 266 aaPredicted RBP3.51□□□□□ -1.85
PCM1-217ENST00000522998 CAAP1Q9H8G2 361 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 LIMCH1Q9UPQ0 1083 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 SSX2IPQ9Y2D8 614 aa3.51□□□□□ -1.85
PCM1-217ENST00000522998 TMA7Q9Y2S6 64 aaKnown RBP3.51□□□□□ -1.85
PCM1-217ENST00000522998 TTC3P53804 2025 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 CCDC154A6NI56 674 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 LACTBL1A8MY62 500 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 TLR2O60603 784 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 TULP3O75386 442 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 RNF8O76064 485 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 GNAI2P04899 355 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 PPIFP30405 207 aaKnown RBP3.5□□□□□ -1.85
PCM1-217ENST00000522998 ID2Q02363 134 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 ARHGAP40Q5TG30 622 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 FAM160B1Q5W0V3 765 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.5□□□□□ -1.85
PCM1-217ENST00000522998 ADAMTS18Q8TE60 1221 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 NSUN6Q8TEA1 469 aaKnown RBP3.5□□□□□ -1.85
PCM1-217ENST00000522998 DDX17Q92841 729 aaKnown RBP3.5□□□□□ -1.85
PCM1-217ENST00000522998 SLC46A1Q96NT5 459 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 CAMK1GQ96NX5 476 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 LENG8Q96PV6 779 aaPredicted RBP3.5□□□□□ -1.85
PCM1-217ENST00000522998 FYTTD1Q96QD9 318 aaKnown RBP3.5□□□□□ -1.85
PCM1-217ENST00000522998 MMS19Q96T76 1030 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 TMEM184CQ9NVA4 438 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 HS3ST3B1Q9Y662 390 aa3.5□□□□□ -1.85
PCM1-217ENST00000522998 TRIM75PA6NK02 468 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 GCATO75600 419 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 GAS8-AS1O95177 125 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 EDNRBP24530 442 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 FPR3P25089 353 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 LOXL3P58215 753 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 KLF1Q13351 362 aaPredicted RBP3.49□□□□□ -1.85
PCM1-217ENST00000522998 SDE2Q6IQ49 451 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 GSG1LQ6UXU4 331 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 DEF8Q6ZN54 512 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 LHFPL2Q6ZUX7 228 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 ANKRD13BQ86YJ7 626 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.49□□□□□ -1.85
PCM1-217ENST00000522998 PELI3Q8N2H9 469 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 AFAP1L2Q8N4X5 818 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 FAM46DQ8NEK8 389 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 ZNF398Q8TD17 642 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 ZPBPQ9BS86 351 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 PTDSS2Q9BVG9 487 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 C1orf43Q9BWL3 253 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 TTYH3Q9C0H2 523 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 GABRQQ9UN88 632 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 CADPSQ9ULU8 1353 aa3.49□□□□□ -1.85
PCM1-217ENST00000522998 BTBD19C9JJ37 291 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 ATXN1LP0C7T5 689 aaKnown RBP3.48□□□□□ -1.85
PCM1-217ENST00000522998 CPEP16870 476 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 C5AR1P21730 350 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 HSD3B2P26439 372 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 PXNP49023 591 aaPredicted RBP3.48□□□□□ -1.85
PCM1-217ENST00000522998 GYS2P54840 703 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 ACAP2Q15057 778 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 RNASE12Q5GAN4 147 aaKnown RBP3.48□□□□□ -1.85
PCM1-217ENST00000522998 CT47A1Q5JQC4 288 aaPredicted RBP3.48□□□□□ -1.85
PCM1-217ENST00000522998 RGS7BPQ6MZT1 257 aaPredicted RBP3.48□□□□□ -1.85
PCM1-217ENST00000522998 TTC7BQ86TV6 843 aa3.48□□□□□ -1.85
PCM1-217ENST00000522998 SPATS2Q86XZ4 545 aaKnown RBP3.48□□□□□ -1.85
PCM1-217ENST00000522998 COG1Q8WTW3 980 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms