RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 NUCKS1Q9H1E3 243 aaKnown RBP12.67□□□□□ -0.38
PVT1-215ENST00000522963 PLEKHA4Q9H4M7 779 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 ABHD10Q9NUJ1 306 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 TMLHEQ9NVH6 421 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 FBXW11Q9UKB1 542 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 GTF3C4Q9UKN8 822 aa12.67□□□□□ -0.38
PVT1-215ENST00000522963 TTC28Q96AY4 2481 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 WDR27A2RRH5 827 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 PRRG1O14668 218 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 CCL16O15467 120 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 ZMYND10O75800 440 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 VDRP11473 427 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 SKILP12757 684 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 CD19P15391 556 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 CYP11B1P15538 503 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 BRD2P25440 801 aaKnown RBP12.66□□□□□ -0.38
PVT1-215ENST00000522963 GNA15P30679 374 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 MTHFRP42898 656 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 BPIFB4P59827 614 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 TSPY1Q01534 308 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 PTK2Q05397 1052 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 MDH1BQ5I0G3 518 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 SLC8B1Q6J4K2 584 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 FAM171BQ6P995 826 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 WDR59Q6PJI9 974 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 CCDC186Q7Z3E2 898 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 NOP9Q86U38 636 aaKnown RBP12.66□□□□□ -0.38
PVT1-215ENST00000522963 ZNF461Q8TAF7 563 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 EPS8L1Q8TE68 723 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 SUSD6Q92537 303 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 OXCT2Q9BYC2 517 aaPredicted RBP12.66□□□□□ -0.38
PVT1-215ENST00000522963 POMKQ9H5K3 350 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 CYP4F11Q9HBI6 524 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 FAM49BQ9NUQ9 324 aa12.66□□□□□ -0.38
PVT1-215ENST00000522963 TSC2P49815 1807 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 GOLGA6L6A8MZA4 724 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 THAP12O43422 761 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 CCDC130P13994 396 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 PRKCIP41743 596 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 PDE6CP51160 858 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 ADCY1Q08828 1119 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 MEA1Q16626 185 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 SLC39A12Q504Y0 691 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 SGO2Q562F6 1265 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 PPP1R26Q5T8A7 1209 aaPredicted RBP12.65□□□□□ -0.38
PVT1-215ENST00000522963 HGSNATQ68CP4 663 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 ARHGAP17Q68EM7 881 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 RNF19BQ6ZMZ0 732 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 CCDC149Q6ZUS6 474 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 GPR149Q86SP6 731 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 FMNL3Q8IVF7 1028 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 ADHFE1Q8IWW8 467 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 DCP1BQ8IZD4 617 aaKnown RBP12.65□□□□□ -0.38
PVT1-215ENST00000522963 GJD3Q8N144 294 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 MYCBPAPQ8TBZ2 947 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 HDAC7Q8WUI4 952 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 SLC20A1Q8WUM9 679 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 DDX1Q92499 740 aaKnown RBP12.65□□□□□ -0.38
PVT1-215ENST00000522963 MYLPFQ96A32 169 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 PCED1BQ96HM7 432 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 NECTIN4Q96NY8 510 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 PANX2Q96RD6 677 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 PHF7Q9BWX1 381 aaPredicted RBP12.65□□□□□ -0.38
PVT1-215ENST00000522963 B3GNT5Q9BYG0 378 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 DNAI2Q9GZS0 605 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 HAUS4Q9H6D7 363 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 NOCTQ9UK39 431 aaKnown RBP12.65□□□□□ -0.38
PVT1-215ENST00000522963 KIAA1257Q9ULG3 409 aa12.65□□□□□ -0.38
PVT1-215ENST00000522963 O00370 1275 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 CLDN5O00501 218 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 SEC24AO95486 1093 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 VNN2O95498 520 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 LRG1P02750 347 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 SERPING1P05155 500 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 PLEKP08567 350 aaPredicted RBP12.64□□□□□ -0.39
PVT1-215ENST00000522963 CFHP08603 1231 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 CCDC172P0C7W6 258 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 CHRNB2P17787 502 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 ADORA2BP29275 332 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 GSDMDP57764 484 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 ZP2Q05996 745 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 KLHL30Q0D2K2 578 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 CCDC173Q0VFZ6 552 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 GPR17Q13304 367 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 TSR1Q2NL82 804 aaKnown RBP12.64□□□□□ -0.39
PVT1-215ENST00000522963 TAF3Q5VWG9 929 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 PAQR9Q6ZVX9 377 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 ZNF571Q7Z3V5 609 aaPredicted RBP12.64□□□□□ -0.39
PVT1-215ENST00000522963 FUKQ8N0W3 1084 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 OLIG1Q8TAK6 271 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 SLC2A14Q8TDB8 520 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 ZNF606Q8WXB4 792 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 CYFIP2Q96F07 1278 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 PPP1R9BQ96SB3 815 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 SYT11Q9BT88 431 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 PRKD2Q9BZL6 878 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 CD320Q9NPF0 282 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 ZNHIT6Q9NWK9 470 aaKnown RBP12.64□□□□□ -0.39
PVT1-215ENST00000522963 ZDHHC7Q9NXF8 308 aa12.64□□□□□ -0.39
PVT1-215ENST00000522963 ARHGAP20Q9P2F6 1191 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms