RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 TTC8Q8TAM2 541 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 EZH1Q92800 747 aaPredicted RBP10.07□□□□□ -0.8
SDC2-207ENST00000522911 CD101Q93033 1021 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 LSM14BQ9BX40 385 aaKnown RBP10.07□□□□□ -0.8
SDC2-207ENST00000522911 DUSP15Q9H1R2 295 aaPredicted RBP10.07□□□□□ -0.8
SDC2-207ENST00000522911 ARRDC1-AS1Q9H2J1 176 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 IKZF4Q9H2S9 585 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 KIAA1586Q9HCI6 787 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 INTS13Q9NVM9 706 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 DUS2Q9NX74 493 aaKnown RBP10.07□□□□□ -0.8
SDC2-207ENST00000522911 GTF3C4Q9UKN8 822 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 CDH9Q9ULB4 789 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 SPAG17Q6Q759 2223 aa10.07□□□□□ -0.8
SDC2-207ENST00000522911 MAP1BP46821 2468 aaKnown RBP10.07□□□□□ -0.8
SDC2-207ENST00000522911 ZZEF1O43149 2961 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 A0A0A0MRY4 1105 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 BCLAF3A2AJT9 711 aaKnown RBP10.06□□□□□ -0.8
SDC2-207ENST00000522911 EIF3DO15371 548 aaKnown RBP eCLIP10.06□□□□□ -0.8
SDC2-207ENST00000522911 TACC1O75410 805 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 RHOBTB1O94844 696 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 GCNT3O95395 438 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 NFATC1O95644 943 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 STAU1O95793 577 aaKnown RBP10.06□□□□□ -0.8
SDC2-207ENST00000522911 CCDC192P0DO97 292 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 WARSP23381 471 aaKnown RBP10.06□□□□□ -0.8
SDC2-207ENST00000522911 MPLP40238 635 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 GPR15P49685 360 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 CASP5P51878 434 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 SNRPFP62306 86 aaKnown RBP10.06□□□□□ -0.8
SDC2-207ENST00000522911 SLC7A9P82251 487 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 SLC39A14Q15043 492 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 DUOXA2Q1HG44 320 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 AASDHQ4L235 1098 aaPredicted RBP10.06□□□□□ -0.8
SDC2-207ENST00000522911 STPG1Q5TH74 334 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 STXBP4Q6ZWJ1 553 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 OSTM1Q86WC4 334 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 RASSF3Q86WH2 238 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 SPATA2LQ8IUW3 424 aaPredicted RBP10.06□□□□□ -0.8
SDC2-207ENST00000522911 GPD1LQ8N335 351 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 ZSWIM2Q8NEG5 633 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 KBTBD7Q8WVZ9 684 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 ANKRD36BP1Q96IX9 119 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 SLC22A12Q96S37 553 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 CBWD1Q9BRT8 395 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 MTMR12Q9C0I1 747 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 TNMDQ9H2S6 317 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 CUEDC2Q9H467 287 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 PDE11AQ9HCR9 933 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 ANGPTL2Q9UKU9 493 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 MAGED2Q9UNF1 606 aaPredicted RBP10.06□□□□□ -0.8
SDC2-207ENST00000522911 SNX9Q9Y5X1 595 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 CLIC4Q9Y696 253 aa10.06□□□□□ -0.8
SDC2-207ENST00000522911 ZNF233A6NK53 670 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 TRIM66O15016 1216 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 CKMP06732 381 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 TMEM191BP0C7N4 346 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 CHRM1P11229 460 aaPredicted RBP10.05□□□□□ -0.8
SDC2-207ENST00000522911 HOXC13P31276 330 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 IFNAR2P48551 515 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 NASPP49321 788 aaPredicted RBP10.05□□□□□ -0.8
SDC2-207ENST00000522911 MRPS21P82921 87 aaKnown RBP10.05□□□□□ -0.8
SDC2-207ENST00000522911 RESTQ13127 1097 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 PSMD2Q13200 908 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 DMC1Q14565 340 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 KCNB1Q14721 858 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 SF3A2Q15428 464 aaKnown RBP10.05□□□□□ -0.8
SDC2-207ENST00000522911 GAB4Q2WGN9 574 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 SPDYCQ5MJ68 293 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 PMS2CLQ68D20 193 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 DENND5BQ6ZUT9 1274 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 WDR49Q8IV35 697 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 CCDC65Q8IXS2 484 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 SYCP3Q8IZU3 236 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 RPLP0P6Q8NHW5 317 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 MYCBPAPQ8TBZ2 947 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 SH3RF2Q8TEC5 729 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 USP33Q8TEY7 942 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 TMEM174Q8WUU8 243 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 OVCA2Q8WZ82 227 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 SAAL1Q96ER3 474 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 INTS4Q96HW7 963 aaKnown RBP10.05□□□□□ -0.8
SDC2-207ENST00000522911 HPDLQ96IR7 371 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 C8orf48Q96LL4 319 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 CYP2S1Q96SQ9 504 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 SYT15Q9BQS2 421 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 LRRC27Q9C0I9 530 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 ZSCAN16Q9H4T2 348 aaPredicted RBP10.05□□□□□ -0.8
SDC2-207ENST00000522911 PANK4Q9NVE7 773 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 KBTBD4Q9NVX7 518 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 CGNQ9P2M7 1197 aaKnown RBP10.05□□□□□ -0.8
SDC2-207ENST00000522911 MAGEC2Q9UBF1 373 aaPredicted RBP10.05□□□□□ -0.8
SDC2-207ENST00000522911 RALGAPA1Q6GYQ0 2036 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 TCHHQ07283 1943 aa10.05□□□□□ -0.8
SDC2-207ENST00000522911 SPEGQ15772 3267 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 K7EQS6 105 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 SLC9A3R1O14745 358 aaPredicted RBP10.04□□□□□ -0.8
SDC2-207ENST00000522911 OAS1P00973 400 aaKnown RBP10.04□□□□□ -0.8
SDC2-207ENST00000522911 TNNC2P02585 160 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 HDCP19113 662 aa10.04□□□□□ -0.8
SDC2-207ENST00000522911 ACAT1P24752 427 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms