RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 MYOGP15173 224 aa22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 NOP2P46087 812 aaKnown RBP22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 RGS7P49802 495 aa22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 PTP4A2Q12974 167 aa22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 SPATA2LQ8IUW3 424 aaPredicted RBP22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 VPS52Q8N1B4 723 aa22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 SLC35F5Q8WV83 523 aa22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 CPXM1Q96SM3 734 aa22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 OXCT2Q9BYC2 517 aaPredicted RBP22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 RHOBTB2Q9BYZ6 727 aa22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 IRX2Q9BZI1 471 aaPredicted RBP22.59■■□□□ 1.21
R3HCC1-208ENST00000522012 PTPRSQ13332 1948 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 AP1G2O75843 785 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 MOCS3O95396 460 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 CYP1A2P05177 515 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 NPR3P17342 541 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 RRM1P23921 792 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 CTNNB1P35222 781 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 BMPR1AP36894 532 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 GLUD2P49448 558 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 PSMD5Q16401 504 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 PTPN20Q4JDL3 420 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 CYP4A22Q5TCH4 519 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 PMF1Q6P1K2 205 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 C4orf50Q6ZRC1 276 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 KLHL23Q8NBE8 558 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 SLC35G2Q8TBE7 412 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 PIK3R5Q8WYR1 880 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 RFFLQ8WZ73 363 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 GDF15Q99988 308 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 CTTNBP2NLQ9P2B4 639 aa22.58■■□□□ 1.21
R3HCC1-208ENST00000522012 NCANO14594 1321 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 A0A0A6YYK5 440 aaPredicted RBP22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 LINC01553A4QN01 128 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 TBC1D4O60343 1298 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 CPB1P15086 417 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 BDNFP23560 247 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 MAP3K7CLP57077 242 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 DSG1Q02413 1049 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 RSPO2Q6UXX9 243 aaPredicted RBP22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 IPO4Q8TEX9 1081 aaKnown RBP22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 C18orf8Q96DM3 657 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 SMARCD1Q96GM5 515 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 TJP2Q9UDY2 1190 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 PIK3R2O00459 728 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 XPO1O14980 1071 aaKnown RBP22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 BEST1O76090 585 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 ERBB2P04626 1255 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 URODP06132 367 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 GNG11P61952 73 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 NFE2Q16621 373 aaPredicted RBP22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 LLGL2Q6P1M3 1020 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 CLEC20AQ6ZU45 233 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 NYAP1Q6ZVC0 841 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 RHOT2Q8IXI1 618 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 RNF10Q8N5U6 811 aaKnown RBP22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 STK32AQ8WU08 396 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 ABI2Q9NYB9 513 aaPredicted RBP22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 MTRRQ9UBK8 725 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 STK39Q9UEW8 545 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 STRIP2Q9ULQ0 834 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 RWDD3Q9Y3V2 267 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 BACE2Q9Y5Z0 518 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 CDY1Q9Y6F8 540 aa22.57■■□□□ 1.2
R3HCC1-208ENST00000522012 TSC2P49815 1807 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 RPL17P18621 184 aaKnown RBP22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 DNAJB2P25686 324 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 SNX16P57768 344 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 ZNF569Q5MCW4 686 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 FBXO22Q8NEZ5 403 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 PGLYRP2Q96PD5 576 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 SMOQ99835 787 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 C17orf80Q9BSJ5 609 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 NUP85Q9BW27 656 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 SLC4A5Q9BY07 1137 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 OSGEPQ9NPF4 335 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 AVENQ9NQS1 362 aaPredicted RBP22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 PCDHB5Q9Y5E4 795 aa22.56■■□□□ 1.2
R3HCC1-208ENST00000522012 E5RJQ4 531 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 PLA2G4AP47712 749 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 GABRB2P47870 512 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 CACNA2D1P54289 1103 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 IFI16Q16666 785 aaKnown RBP22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 PIGZQ86VD9 579 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 AUTS2Q8WXX7 1259 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 KCNK16Q96T55 309 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 MIS12Q9H081 205 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 MRPL17Q9NRX2 175 aaKnown RBP22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 PARVAQ9NVD7 372 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 MTUS1Q9ULD2 1270 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 COG5Q9UP83 839 aa22.55■■□□□ 1.2
R3HCC1-208ENST00000522012 GOLGA8SH3BPF8 625 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 ADAM12O43184 909 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 ARHGEF15O94989 841 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 CA3P07451 260 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 CYP2F1P24903 491 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 OR1D2P34982 312 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 CA8P35219 290 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 GPR17Q13304 367 aa22.54■■□□□ 1.2
R3HCC1-208ENST00000522012 DNAJC24Q6P3W2 148 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms