RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CD101Q93033 1021 aa7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 ZNF419Q96HQ0 510 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 MTA3Q9BTC8 594 aa7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 SLC26A6Q9BXS9 759 aa7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 TNMDQ9H2S6 317 aa7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 GAREM1Q9H706 876 aa7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 SEPT3Q9UH03 358 aa7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 PCDHA7Q9UN72 937 aa7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 PCDHGB2Q9Y5G2 931 aa7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 SLC12A7Q9Y666 1083 aa7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 NUP210Q8TEM1 1887 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-227ENST00000521387 PDZD2O15018 2839 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 IGHV1OR15-9A0A0B4J2B8 117 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 ANO9A1A5B4 782 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 TMEM189-UBE2V1I3L0A0 370 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 FLRT2O43155 660 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 ADAM23O75077 832 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 YEATS4O95619 227 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 SRGAP2CP0DJJ0 459 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 TNFRSF8P28908 595 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 ACTN2P35609 894 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 SREBF1P36956 1147 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 NT5C2P49902 561 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 UCNP55089 124 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 MESP2Q0VG99 397 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 STK38Q15208 465 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 RTN1Q16799 776 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 HS1BP3Q53T59 392 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 LMBRD2Q68DH5 695 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 LIAT1Q6ZQX7 453 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 ZSCAN30Q86W11 494 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 CDR2LQ86X02 465 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 TICAM1Q8IUC6 712 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 ZNF654Q8IZM8 581 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 ELMOD1Q8N336 334 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 TMTC2Q8N394 836 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 FSIP1Q8NA03 581 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 ZNF248Q8NDW4 579 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 POM121Q96HA1 1249 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 HSPA12BQ96MM6 686 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 SPZ1Q9BXG8 430 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 SLC46A2Q9BY10 475 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 ZDHHC5Q9C0B5 715 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 THG1LQ9NWX6 298 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 USP25Q9UHP3 1055 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 FBXL5Q9UKA1 691 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 COL4A3BPQ9Y5P4 624 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 STK36Q9NRP7 1315 aa7.95□□□□□ -1.14
CTNNA1-227ENST00000521387 A0A1W2PQ27 194 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 A0A1W2PQ64 194 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 hCG_1642624A0A1W2PR95 340 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ERICH2A1L162 156 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 K7ENP7 123 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 SPTLC2O15270 562 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ALDH1A2O94788 518 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ADCY5O95622 1261 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 GRNP28799 593 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ME1P48163 572 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 DNM2P50570 870 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 PRR20EP86478 221 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 PRR20CP86479 221 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 PRR20DP86480 221 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 PRR20BP86481 221 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 PRR20AP86496 221 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 CYP4F8P98187 520 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 SART3Q15020 963 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 GAB4Q2WGN9 574 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 HLA-BQ31612 363 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ANO6Q4KMQ2 910 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 EMC10Q5UCC4 262 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 TPGS2Q68CL5 300 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ADALQ6DHV7 355 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 INO80CQ6PI98 192 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 RNF19BQ6ZMZ0 732 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 CCDC73Q6ZRK6 1079 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 FMR1NBQ8N0W7 255 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ALLCQ8N6M5 410 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 IL17RCQ8NAC3 791 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 FANCBQ8NB91 859 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 TXNDC5Q8NBS9 432 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 HMGB4Q8WW32 186 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 PRPF31Q8WWY3 499 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 CRYGNQ8WXF5 182 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 CCDC51Q96ER9 411 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 RRP36Q96EU6 259 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 UBAC1Q9BSL1 405 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ANO3Q9BYT9 981 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ATXN3LQ9H3M9 355 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 TASP1Q9H6P5 420 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ECT2Q9H8V3 914 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 CBX8Q9HC52 389 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 LRRC4CQ9HCJ2 640 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 ZDHHC4Q9NPG8 344 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 CD93Q9NPY3 652 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 PARP2Q9UGN5 583 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 AFF4Q9UHB7 1163 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 YIPF1Q9Y548 306 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 MED13Q9UHV7 2174 aa7.94□□□□□ -1.14
CTNNA1-227ENST00000521387 MYO18AQ92614 2054 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms