RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 SELENONQ9NZV5 590 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 WHRNQ9P202 907 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 STX18Q9P2W9 335 aaKnown RBP10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 SLC7A8Q9UHI5 535 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 NCANO14594 1321 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 NOTOA8MTQ0 251 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 ABLIM1O14639 778 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 TBC1D12O60347 775 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 F7P08709 466 aaPredicted RBP10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 SOX11P35716 441 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 OCRLQ01968 901 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 QRICH1Q2TAL8 776 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 ZCCHC8Q6NZY4 707 aaKnown RBP10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 IFNLR1Q8IU57 520 aaPredicted RBP10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 PPP2R3CQ969Q6 453 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 PAFAH2Q99487 392 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 EIF2AK1Q9BQI3 630 aaKnown RBP10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 AGTPBP1Q9UPW5 1226 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 A0A1B0GTW7 788 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 E7ENQ6 273 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 TSPAN9O75954 239 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 FOSL1P15407 271 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 MZF1P28698 734 aaPredicted RBP10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 CD97P48960 835 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 GEMIN4P57678 1058 aaKnown RBP10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 PCSK7Q16549 785 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 KCNT1Q5JUK3 1230 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 SYDE2Q5VT97 1194 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 DPY19L2P1Q6NXN4 242 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 PPP4R3CPQ6ZMV5 832 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 BPHLQ86WA6 291 aaPredicted RBP10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 TMPRSS6Q8IU80 811 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 OR6Y1Q8NGX8 325 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 POMGNT1Q8WZA1 660 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 TRIM56Q9BRZ2 755 aaKnown RBP10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 MRPL1Q9BYD6 325 aaKnown RBP10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 NRDE2Q9H7Z3 1164 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 GPRC5CQ9NQ84 441 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 ZNF804BA4D1E1 1349 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 SIGLEC16A6NMB1 481 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 ASLP04424 464 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 PMLP29590 882 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 GMPRP36959 345 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 RXRGP48443 463 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 HPCAP84074 193 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 C16orf72Q14CZ0 275 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 PDK3Q15120 406 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 SIX1Q15475 284 aaPredicted RBP10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 CHI3L2Q15782 390 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 WDR45BQ5MNZ6 344 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 ANKS1BQ7Z6G8 1248 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 EBF4Q9BQW3 602 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 GPR88Q9GZN0 384 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 TPK1Q9H3S4 243 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 ARMC7Q9H6L4 198 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 PARVGQ9HBI0 331 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 COMMD3-BMI1R4GMX3 469 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 ZMYM2Q9UBW7 1377 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 ARHGEF35A5YM69 484 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 NOP56O00567 594 aaKnown RBP10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 C2CD2LO14523 706 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 TP73O15350 636 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 LYPLA1O75608 230 aaPredicted RBP10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 RAG1P15918 1043 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 CLUL1Q15846 466 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 ZFPM1Q8IX07 1006 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 GRK7Q8WTQ7 553 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 FAM192AQ9GZU8 254 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 PARVBQ9HBI1 364 aa10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 PIH1D1Q9NWS0 290 aaKnown RBP10.54□□□□□ -0.72
PDGFRB-207ENST00000520579 FAM86B1E9PN63 330 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 C6orf229H3BNL8 230 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 AVILO75366 819 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 CLPTM1O96005 669 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 PROCP04070 461 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 INHBAP08476 426 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 FAM86B2P0C5J1 330 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 PRKACBP22694 351 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 CIITAP33076 1130 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 FAAP100Q0VG06 881 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 TJAP1Q5JTD0 557 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 METTL21CQ5VZV1 264 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 PPP2R2DQ66LE6 453 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 SPOPLQ6IQ16 392 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 SESTD1Q86VW0 696 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 FERD3LQ96RJ6 166 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 TMEM109Q9BVC6 243 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 SEZ6LQ9BYH1 1024 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 SNX25Q9H3E2 840 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 LMO7Q8WWI1 1683 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 SEC24DO94855 1032 aaPredicted RBP10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 CFHP08603 1231 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 PCP11498 1178 aaKnown RBP10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 FGFR3P22607 806 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 VAMP7P51809 220 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 SOX10P56693 466 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 CDK16Q00536 496 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 ANKRD22Q5VYY1 191 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 C16orf46Q6P387 395 aa10.53□□□□□ -0.72
PDGFRB-207ENST00000520579 CBWD2Q8IUF1 395 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms