RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	KIF9	Q9HAQ2	790 aa		25.77	■■□□□ 1.72
CNOT7-204	ENST00000518885	SLC16A3	O15427	465 aa	Known RBP	25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	PI15	O43692	258 aa		25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	ASS1	P00966	412 aa	Known RBP	25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	MLLT6	P55198	1093 aa	Predicted RBP	25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	FCHO2	Q0JRZ9	810 aa		25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	UBXN2B	Q14CS0	331 aa		25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	SCARA5	Q6ZMJ2	495 aa		25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	CMTM8	Q8IZV2	173 aa		25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	ATOH1	Q92858	354 aa	Predicted RBP	25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	C8orf48	Q96LL4	319 aa		25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	BCO2	Q9BYV7	579 aa		25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	SMYD3	Q9H7B4	428 aa		25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	TMEM8A	Q9HCN3	771 aa		25.76	■■□□□ 1.71
CNOT7-204	ENST00000518885	HLA-DRA	P01903	254 aa		25.75	■■□□□ 1.71
CNOT7-204	ENST00000518885	PPP3CC	P48454	512 aa		25.75	■■□□□ 1.71
CNOT7-204	ENST00000518885	GCLM	P48507	274 aa		25.75	■■□□□ 1.71
CNOT7-204	ENST00000518885	SDHAF4	Q5VUM1	108 aa		25.75	■■□□□ 1.71
CNOT7-204	ENST00000518885	KRT39	Q6A163	491 aa		25.75	■■□□□ 1.71
CNOT7-204	ENST00000518885	DENND5B	Q6ZUT9	1274 aa		25.75	■■□□□ 1.71
CNOT7-204	ENST00000518885	MON1A	Q86VX9	555 aa		25.75	■■□□□ 1.71
CNOT7-204	ENST00000518885	UNC93A	Q86WB7	457 aa		25.75	■■□□□ 1.71
CNOT7-204	ENST00000518885	BPIFB1	Q8TDL5	484 aa		25.75	■■□□□ 1.71
CNOT7-204	ENST00000518885	HEBP1	Q9NRV9	189 aa		25.75	■■□□□ 1.71
CNOT7-204	ENST00000518885	TRIM49	P0CI25	452 aa		25.74	■■□□□ 1.71
CNOT7-204	ENST00000518885	TRIM49C	P0CI26	452 aa		25.74	■■□□□ 1.71
CNOT7-204	ENST00000518885	ADSSL1	Q8N142	457 aa		25.74	■■□□□ 1.71
CNOT7-204	ENST00000518885	MAB21L3	Q8N8X9	362 aa		25.74	■■□□□ 1.71
CNOT7-204	ENST00000518885	DHTKD1	Q96HY7	919 aa	Predicted RBP	25.74	■■□□□ 1.71
CNOT7-204	ENST00000518885	FAXDC2	Q96IV6	333 aa		25.74	■■□□□ 1.71
CNOT7-204	ENST00000518885	SLC46A2	Q9BY10	475 aa		25.74	■■□□□ 1.71
CNOT7-204	ENST00000518885	FAM170B	A6NMN3	283 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	PFKL	P17858	780 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	NOP14	P78316	857 aa	Known RBP	25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	TTC39C	Q8N584	583 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	MED10	Q9BTT4	135 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	FOXQ1	Q9C009	403 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	DPEP3	Q9H4B8	488 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	C8orf33	Q9H7E9	229 aa	Predicted RBP	25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	MMRN2	Q9H8L6	949 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	CYP3A43	Q9HB55	503 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	LTB4R2	Q9NPC1	389 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	TDP1	Q9NUW8	608 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	PIAS3	Q9Y6X2	628 aa		25.73	■■□□□ 1.71
CNOT7-204	ENST00000518885	NUP210	Q8TEM1	1887 aa	Predicted RBP	25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	TRAV19	A0A0A6YYK7	116 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885		H0Y858	1186 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	DCN	P07585	359 aa	Known RBP	25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	USP17L7	P0C7H9	530 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	MXI1	P50539	228 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	KPNA1	P52294	538 aa	Predicted RBP	25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	CDH8	P55286	799 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	MCCD1	P59942	119 aa	Predicted RBP	25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	UBE2H	P62256	183 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	ZNF268	Q14587	947 aa	Predicted RBP	25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	CCDC142	Q17RM4	750 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	C1orf220	Q5T0J3	134 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	CC2D1A	Q6P1N0	951 aa	Predicted RBP	25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	TMEM150A	Q86TG1	271 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	NIF3L1	Q9GZT8	377 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885	TRPM5	Q9NZQ8	1165 aa		25.72	■■□□□ 1.71
CNOT7-204	ENST00000518885		F8VP50	259 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	RAP1GAP	P47736	663 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	PPP3CA	Q08209	521 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	WDR44	Q5JSH3	913 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	TCERG1L	Q5VWI1	586 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	TXNDC8	Q6A555	127 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	ANKRD40	Q6AI12	368 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	FBXL13	Q8NEE6	735 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	SMARCD1	Q96GM5	515 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	SLITRK1	Q96PX8	696 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	METTL14	Q9HCE5	456 aa	Known RBP	25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	TRPC7	Q9HCX4	862 aa		25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	ARMCX3	Q9UH62	379 aa	Predicted RBP	25.71	■■□□□ 1.71
CNOT7-204	ENST00000518885	BICDL2	A1A5D9	508 aa		25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	RTN3	O95197	1032 aa	Predicted RBP	25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	PRAMEF12	O95522	483 aa		25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	CKM	P06732	381 aa		25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	CCNE1	P24864	410 aa		25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	ASPA	P45381	313 aa		25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	ANGPT1	Q15389	498 aa		25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	TAS1R2	Q8TE23	839 aa		25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	ERCC4	Q92889	916 aa	Predicted RBP	25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	TTLL2	Q9BWV7	592 aa		25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	B3GNT5	Q9BYG0	378 aa		25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	FAM124B	Q9H5Z6	455 aa	Predicted RBP	25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	DMAP1	Q9NPF5	467 aa	Predicted RBP	25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	MAN1B1	Q9UKM7	699 aa		25.7	■■□□□ 1.7
CNOT7-204	ENST00000518885	NDST1	P52848	882 aa		25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	DCAF17	Q5H9S7	520 aa	Predicted RBP	25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	ZC3H3	Q8IXZ2	948 aa	Known RBP	25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	CRYBG2	Q8N1P7	616 aa		25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	STKLD1	Q8NE28	680 aa		25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	PDZD8	Q8NEN9	1154 aa		25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	FAM3C	Q92520	227 aa		25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	RSPRY1	Q96DX4	576 aa		25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	EEF2KMT	Q96G04	330 aa		25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	CEP63	Q96MT8	703 aa		25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	IER2	Q9BTL4	223 aa		25.69	■■□□□ 1.7
CNOT7-204	ENST00000518885	ZNF518B	Q9C0D4	1074 aa		25.69	■■□□□ 1.7

Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms