RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 CXCL12P48061 93 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 CCR3P51677 355 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 SATB1Q01826 763 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 MBTD1Q05BQ5 628 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 GRIK3Q13003 919 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 SRSF5Q13243 272 aaKnown RBP6.65□□□□□ -1.34
PABPC1-207ENST00000518716 PPP2R5CQ13362 524 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 SIM2Q14190 667 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-207ENST00000518716 HSP90AA2PQ14568 343 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-207ENST00000518716 PABPC1LQ4VXU2 614 aaKnown RBP6.65□□□□□ -1.34
PABPC1-207ENST00000518716 FAM78AQ5JUQ0 283 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 FAM171A1Q5VUB5 890 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 NOTUMQ6P988 496 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 OGFOD3Q6PK18 319 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 MOXD1Q6UVY6 613 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 SYNE3Q6ZMZ3 975 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 FBXL16Q8N461 479 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 SPEM1Q8N4L4 309 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 C1orf127Q8N9H9 656 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 TMEM102Q8N9M5 508 aaPredicted RBP6.65□□□□□ -1.34
PABPC1-207ENST00000518716 RNF149Q8NC42 400 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 SLC7A14Q8TBB6 771 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 CPB2Q96IY4 423 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 TCEANC2Q96MN5 208 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 LSM14BQ9BX40 385 aaKnown RBP6.65□□□□□ -1.34
PABPC1-207ENST00000518716 NRSN2Q9GZP1 204 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 CXCL16Q9H2A7 254 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 LMAN1LQ9HAT1 526 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 TRPV4Q9HBA0 871 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 C2orf42Q9NWW7 574 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 MTRRQ9UBK8 725 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 TCEAL9Q9UHQ7 104 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 VAV3Q9UKW4 847 aa6.65□□□□□ -1.34
PABPC1-207ENST00000518716 SF3B1O75533 1304 aaKnown RBP eCLIP6.65□□□□□ -1.35
PABPC1-207ENST00000518716 GON4LQ3T8J9 2241 aa6.65□□□□□ -1.35
PABPC1-207ENST00000518716 ASCC3Q8N3C0 2202 aaKnown RBP6.64□□□□□ -1.35
PABPC1-207ENST00000518716 KLF18A0A0U1RQI7 1052 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 GOLGA8AA7E2F4 631 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 GOLGA8BA8MQT2 603 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 CHURC1-FNTBB4DL54 471 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 TMEM189-UBE2V1I3L0A0 370 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 MOSPD3O75425 235 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 ABLIM3O94929 683 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 TDP2O95551 362 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 ZNF806P0C7X5 589 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 OR1D2P34982 312 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 ARL2P36404 184 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 CCR2P41597 374 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 FNTBP49356 437 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 TUSC3Q13454 348 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 ACAP1Q15027 740 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 PSMD5Q16401 504 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 MLANAQ16655 118 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 ADCK5Q3MIX3 580 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 LIN9Q5TKA1 542 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 LONP2Q86WA8 852 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 C4orf19Q8IY42 314 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 BICD2Q8TD16 824 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 ASAP3Q8TDY4 903 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 TBCKQ8TEA7 893 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 CCDC12Q8WUD4 166 aaPredicted RBP6.64□□□□□ -1.35
PABPC1-207ENST00000518716 ING5Q8WYH8 240 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 FAM3CQ92520 227 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 HAS1Q92839 578 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 KCNB2Q92953 911 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 MCRS1Q96EZ8 462 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 LOXL4Q96JB6 756 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 ZSWIM3Q96MP5 696 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 ASB16Q96NS5 453 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 ZNF334Q9HCZ1 680 aaPredicted RBP6.64□□□□□ -1.35
PABPC1-207ENST00000518716 KCNMB3Q9NPA1 279 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 SH3GLB2Q9NR46 395 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 RAB23Q9ULC3 237 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 NDRG2Q9UN36 371 aaKnown RBP6.64□□□□□ -1.35
PABPC1-207ENST00000518716 BACE2Q9Y5Z0 518 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 DSPP15924 2871 aaKnown RBP6.64□□□□□ -1.35
PABPC1-207ENST00000518716 DMXL2Q8TDJ6 3036 aa6.64□□□□□ -1.35
PABPC1-207ENST00000518716 CCDC196A0A1B0GTZ2 297 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 B4GALT5O43286 388 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 SLC37A4O43826 429 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 KCNK5O95279 499 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 P4HBP07237 508 aaKnown RBP6.63□□□□□ -1.35
PABPC1-207ENST00000518716 C1QTNF9P0C862 333 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 CEBPBP17676 345 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 PSMC3P17980 439 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 YWHABP31946 246 aaKnown RBP6.63□□□□□ -1.35
PABPC1-207ENST00000518716 EPHA5P54756 1037 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 EVCP57679 992 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 SPIRE1Q08AE8 756 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 AKAP13Q12802 2813 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 ACACAQ13085 2346 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 MXD4Q14582 209 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-207ENST00000518716 PPP2R5DQ14738 602 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 EMC2Q15006 297 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 SF3A2Q15428 464 aaKnown RBP6.63□□□□□ -1.35
PABPC1-207ENST00000518716 SLC8B1Q6J4K2 584 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 PDXDC1Q6P996 788 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 SLC27A1Q6PCB7 646 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 VITQ6UXI7 678 aa6.63□□□□□ -1.35
PABPC1-207ENST00000518716 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms