RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 MTMR3Q13615 1198 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 ZNF394Q53GI3 561 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 TCP11X2Q5H9J9 407 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 GAREM2Q75VX8 874 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 PPM1KQ8N3J5 372 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 C12orf29Q8N999 325 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 NXPE3Q969Y0 559 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 MCRS1Q96EZ8 462 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 TRMT2BQ96GJ1 504 aaKnown RBP23.36■■□□□ 1.33
VEGFA-217ENST00000518538 MYRFLQ96LU7 910 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 KCNK12Q9HB15 430 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 IL21Q9HBE4 155 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 FAM49BQ9NUQ9 324 aa23.36■■□□□ 1.33
VEGFA-217ENST00000518538 UXTQ9UBK9 157 aaPredicted RBP23.36■■□□□ 1.33
VEGFA-217ENST00000518538 PRKCSHP14314 528 aaPredicted RBP23.35■■□□□ 1.33
VEGFA-217ENST00000518538 CACNA2D1P54289 1103 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 RAD23BP54727 409 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 GCNT1Q02742 428 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 HTR4Q13639 388 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 TEAD2Q15562 447 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 SKOR2Q2VWA4 1001 aaPredicted RBP23.35■■□□□ 1.33
VEGFA-217ENST00000518538 VWA3BQ502W6 1294 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 MIIPQ5JXC2 388 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 CDKAL1Q5VV42 579 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 GBP6Q6ZN66 633 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 MTSS1LQ765P7 747 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 UBR7Q8N806 425 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 SLC4A11Q8NBS3 891 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 SLC2A14Q8TDB8 520 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 TMEM176AQ96HP8 235 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 GCNAQ96QF7 691 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 HNRNPABQ99729 332 aaKnown RBP23.35■■□□□ 1.33
VEGFA-217ENST00000518538 GPR88Q9GZN0 384 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 NAT10Q9H0A0 1025 aaKnown RBP23.35■■□□□ 1.33
VEGFA-217ENST00000518538 ATXN3LQ9H3M9 355 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 NDST4Q9H3R1 872 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 KRT82Q9NSB4 513 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 TMEM30AQ9NV96 361 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 MAGED2Q9UNF1 606 aaPredicted RBP23.35■■□□□ 1.33
VEGFA-217ENST00000518538 SORCS3Q9UPU3 1222 aa23.35■■□□□ 1.33
VEGFA-217ENST00000518538 ANO6Q4KMQ2 910 aa23.34■■□□□ 1.33
VEGFA-217ENST00000518538 TRIM65Q6PJ69 517 aa23.34■■□□□ 1.33
VEGFA-217ENST00000518538 POTEHQ6S545 545 aa23.34■■□□□ 1.33
VEGFA-217ENST00000518538 ARHGEF19Q8IW93 802 aa23.34■■□□□ 1.33
VEGFA-217ENST00000518538 CYFIP2Q96F07 1278 aa23.34■■□□□ 1.33
VEGFA-217ENST00000518538 CRACR2AQ9BSW2 395 aa23.34■■□□□ 1.33
VEGFA-217ENST00000518538 DMAP1Q9NPF5 467 aaPredicted RBP23.34■■□□□ 1.33
VEGFA-217ENST00000518538 FANCLQ9NW38 375 aa23.34■■□□□ 1.33
VEGFA-217ENST00000518538 AP1G2O75843 785 aa23.33■■□□□ 1.33
VEGFA-217ENST00000518538 EXOC3L4Q17RC7 722 aa23.33■■□□□ 1.33
VEGFA-217ENST00000518538 ARHGAP15Q53QZ3 475 aa23.33■■□□□ 1.33
VEGFA-217ENST00000518538 DENND5BQ6ZUT9 1274 aa23.33■■□□□ 1.33
VEGFA-217ENST00000518538 KAT5Q92993 513 aa23.33■■□□□ 1.33
VEGFA-217ENST00000518538 HEXIM2Q96MH2 286 aaKnown RBP23.33■■□□□ 1.33
VEGFA-217ENST00000518538 FUCA2Q9BTY2 467 aa23.33■■□□□ 1.33
VEGFA-217ENST00000518538 EHD2Q9NZN4 543 aa23.33■■□□□ 1.33
VEGFA-217ENST00000518538 NUMBLQ9Y6R0 609 aa23.33■■□□□ 1.33
VEGFA-217ENST00000518538 NCOR1O75376 2440 aa23.33■■□□□ 1.33
VEGFA-217ENST00000518538 F11P03951 625 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 FAM200BP0CF97 657 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 ADORA2BP29275 332 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 TDGQ13569 410 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 PHLDB3Q6NSJ2 640 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 PARM1Q6UWI2 310 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 RRAGAQ7L523 313 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 TMEM150AQ86TG1 271 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 RSAD2Q8WXG1 361 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 FGF14Q92915 247 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 ZSWIM3Q96MP5 696 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 KCNK16Q96T55 309 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 BPIFA3Q9BQP9 254 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 SLITRK6Q9H5Y7 841 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 CSNK1G1Q9HCP0 422 aa23.32■■□□□ 1.32
VEGFA-217ENST00000518538 MUC3AQ02505 3323 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 SYCE3A1L190 88 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 SLC9A1P19634 815 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 ACO1P21399 889 aaKnown RBP23.31■■□□□ 1.32
VEGFA-217ENST00000518538 PON1P27169 355 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 ZXDAP98168 799 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 NCAPHQ15003 741 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 FAM78AQ5JUQ0 283 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 STXBP5Q5T5C0 1151 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 GPR158Q5T848 1215 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 PPP1R26Q5T8A7 1209 aaPredicted RBP23.31■■□□□ 1.32
VEGFA-217ENST00000518538 JAKMIP2Q96AA8 810 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 FAM81BQ96LP2 452 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 KREMEN1Q96MU8 473 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 ASB16Q96NS5 453 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 SMOQ99835 787 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 TTLL2Q9BWV7 592 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 EPHX3Q9H6B9 360 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 TAB2Q9NYJ8 693 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 ZMYM5Q9UJ78 669 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 PCDHB4Q9Y5E5 795 aa23.31■■□□□ 1.32
VEGFA-217ENST00000518538 PES1O00541 588 aaKnown RBP23.3■■□□□ 1.32
VEGFA-217ENST00000518538 TADA3O75528 432 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 USP46P62068 366 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 CYP4F8P98187 520 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 KRT31Q15323 416 aa23.3■■□□□ 1.32
VEGFA-217ENST00000518538 ARHGAP17Q68EM7 881 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms