RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 SLC30A9Q6PML9 568 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 USP17L6PQ6QN14 398 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 CYP20A1Q6UW02 462 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 TRIM67Q6ZTA4 783 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 Q6ZVL8 140 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 VSIG10LQ86VR7 867 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 RASGRP3Q8IV61 690 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 PQLC1Q8N2U9 271 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 ZGPATQ8N5A5 531 aaKnown RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 DCAF11Q8TEB1 546 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 SMCR8Q8TEV9 937 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 SCFD2Q8WU76 684 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 SLC22A17Q8WUG5 538 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 FBLIM1Q8WUP2 373 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 DEPDC1BQ8WUY9 529 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 HOXB13Q92826 284 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 KTI12Q96EK9 354 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 HIST1H2AHQ96KK5 128 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 C16orf45Q96MC5 204 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 UHRF1Q96T88 793 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 HIST1H2AJQ99878 128 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 DBNDD2Q9BQY9 259 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 FUZQ9BT04 418 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 MAK16Q9BXY0 300 aaKnown RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 MUC13Q9H3R2 512 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 SEMA6CQ9H3T2 930 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 IL21RQ9HBE5 538 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 SLC35C2Q9NQQ7 365 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 USP40Q9NVE5 1235 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 TBCCD1Q9NVR7 557 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 AKAP7Q9P0M2 348 aaPredicted RBP4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 ARHGAP20Q9P2F6 1191 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 ASH2LQ9UBL3 628 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 FBXL5Q9UKA1 691 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 COG5Q9UP83 839 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 TRIM17Q9Y577 477 aa4.28□□□□□ -1.72
RNU4-60P-201ENST00000517239 SYNJ2BP-COX16A0A087WUM0 186 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 A0A0A6YYJ9 748 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 KRT87PA6NCN2 255 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 A8MXE2 369 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 H0YAE9 185 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 MYO1CO00159 1063 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 IGF2BP3O00425 579 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 CAPN9O14815 690 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 HNRNPRO43390 633 aaKnown RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 SYNCRIPO60506 623 aaKnown RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 COQ9O75208 318 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 PPFIA2O75334 1257 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 MATN4O95460 622 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 METTL18O95568 372 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 NTSR2O95665 410 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 NTRK1P04629 796 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 AMY1AP04745 511 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 ANXA6P08133 673 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 KRT13P13646 458 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 ALADP13716 330 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 DDCP20711 480 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 ENDOUP21128 410 aaKnown RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 TBXAS1P24557 533 aaPredicted RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 RPL10P27635 214 aaKnown RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 ECHS1P30084 290 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 TM4SF1P30408 202 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 CASQ1P31415 396 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 GRK5P34947 590 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 PRPHP41219 470 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 CAPZA2P47755 286 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 YWHAHQ04917 246 aaPredicted RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 ACTN3Q08043 901 aaPredicted RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 NSUN2Q08J23 767 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 KLHL30Q0D2K2 578 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 MYO1EQ12965 1108 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 PDCLQ13371 301 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 TNFAIP1Q13829 316 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 NAA25Q14CX7 972 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 MED22Q15528 200 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 CCDC178Q5BJE1 867 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 FAXCQ5TGI0 409 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 EMC10Q5UCC4 262 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 KDELC1Q6UW63 502 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZDHHC24Q6UX98 284 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 RNF111Q6ZNA4 994 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 SV2AQ7L0J3 742 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 METTL23Q86XA0 190 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 SCN4BQ8IWT1 228 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 TRIM48Q8IWZ4 208 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 TBC1D21Q8IYX1 336 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 AGGF1Q8N302 714 aaeCLIP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 C10orf53Q8N6V4 93 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 FRMD1Q8N878 549 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 POMGNT2Q8NAT1 580 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 AGBL5Q8NDL9 886 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZNF540Q8NDQ6 660 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 CHST13Q8NET6 341 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 NFKBIDQ8NI38 313 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 CPT1BQ92523 772 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 RSC1A1Q92681 617 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 PTP4A1Q93096 173 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 SPSB4Q96A44 273 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms