RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 MCRS1Q96EZ8 462 aa12.6□□□□□ -0.39
LMNA-224ENST00000515711 RBM41Q96IZ5 413 aaKnown RBP12.6□□□□□ -0.39
LMNA-224ENST00000515711 CPXM1Q96SM3 734 aa12.6□□□□□ -0.39
LMNA-224ENST00000515711 CDX2Q99626 313 aaPredicted RBP12.6□□□□□ -0.39
LMNA-224ENST00000515711 ELAC1Q9H777 363 aaKnown RBP12.6□□□□□ -0.39
LMNA-224ENST00000515711 DDX56Q9NY93 547 aaKnown RBP12.6□□□□□ -0.39
LMNA-224ENST00000515711 SMARCAL1Q9NZC9 954 aa12.6□□□□□ -0.39
LMNA-224ENST00000515711 DSEQ9UL01 958 aa12.6□□□□□ -0.39
LMNA-224ENST00000515711 PTPRDP23468 1912 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 MEIS3P2A8K0S8 358 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 GABRDO14764 452 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 PCSK1P29120 753 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 MARCKSL1P49006 195 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 CLCNKBP51801 687 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 VSNL1P62760 191 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 UPP1Q16831 310 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 C2CD6Q53TS8 623 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 CYP4A22Q5TCH4 519 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 DSTYKQ6XUX3 929 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 POLNQ7Z5Q5 900 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 SLC13A5Q86YT5 568 aaPredicted RBP12.59□□□□□ -0.39
LMNA-224ENST00000515711 IFT20Q8IY31 132 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 EIF1ADQ8N9N8 165 aaKnown RBP12.59□□□□□ -0.39
LMNA-224ENST00000515711 RNF169Q8NCN4 708 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 B3GALNT2Q8NCR0 500 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 EXD1Q8NHP7 514 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.59□□□□□ -0.39
LMNA-224ENST00000515711 SEPT8Q92599 483 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 SENP8Q96LD8 212 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 KRT12Q99456 494 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 LRRC1Q9BTT6 524 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 SLC4A5Q9BY07 1137 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 EPC1Q9H2F5 836 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 METTL5Q9NRN9 209 aaKnown RBP12.59□□□□□ -0.39
LMNA-224ENST00000515711 FAM49BQ9NUQ9 324 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 KANSL3Q9P2N6 904 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 CYTH4Q9UIA0 394 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
LMNA-224ENST00000515711 GOLGA8SH3BPF8 625 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 DPYSL4O14531 572 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 PHF2O75151 1096 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 HEXIM1O94992 359 aaKnown RBP12.58□□□□□ -0.4
LMNA-224ENST00000515711 CYP11A1P05108 521 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 FGFR1P11362 822 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 PSMA2P25787 234 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 CHRNA3P32297 505 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 RPL34P49207 117 aaKnown RBP12.58□□□□□ -0.4
LMNA-224ENST00000515711 RNASE9P60153 205 aaKnown RBP12.58□□□□□ -0.4
LMNA-224ENST00000515711 COPS2P61201 443 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 RPL7AP62424 266 aaKnown RBP12.58□□□□□ -0.4
LMNA-224ENST00000515711 FAM189BP81408 668 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 ZNF211Q13398 564 aaPredicted RBP12.58□□□□□ -0.4
LMNA-224ENST00000515711 DHX34Q14147 1143 aaKnown RBP12.58□□□□□ -0.4
LMNA-224ENST00000515711 MBTPS1Q14703 1052 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 HADHQ16836 314 aaKnown RBP12.58□□□□□ -0.4
LMNA-224ENST00000515711 ODF2Q5BJF6 829 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 FAM102AQ5T9C2 384 aaPredicted RBP12.58□□□□□ -0.4
LMNA-224ENST00000515711 ZNF697Q5TEC3 545 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 LLGL2Q6P1M3 1020 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 PHLDB2Q86SQ0 1253 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 TMEM110Q86TL2 294 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 TTC30AQ86WT1 665 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 METTL23Q86XA0 190 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 C12orf50Q8NA57 414 aaPredicted RBP12.58□□□□□ -0.4
LMNA-224ENST00000515711 UBA3Q8TBC4 463 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 SLC35F5Q8WV83 523 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 HSFY1Q96LI6 401 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 HNRNPABQ99729 332 aaKnown RBP12.58□□□□□ -0.4
LMNA-224ENST00000515711 TRIM7Q9C029 511 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 RAB17Q9H0T7 212 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 DPEP3Q9H4B8 488 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 ST7Q9NRC1 585 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 HOMER3Q9NSC5 361 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 RNF19AQ9NV58 838 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 TMEM161AQ9NX61 479 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 MIOSQ9NXC5 875 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 RASAL2Q9UJF2 1139 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 CDH9Q9ULB4 789 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 NME7Q9Y5B8 376 aa12.58□□□□□ -0.4
LMNA-224ENST00000515711 FAM187AA6NFU0 413 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 CASTOR2A6NHX0 329 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 E5RJQ4 531 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 TMEM189-UBE2V1I3L0A0 370 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 XPO1O14980 1071 aaKnown RBP12.57□□□□□ -0.4
LMNA-224ENST00000515711 SART1O43290 800 aaKnown RBP12.57□□□□□ -0.4
LMNA-224ENST00000515711 HOXA2O43364 376 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 RNF8O76064 485 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 PFKMP08237 780 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 KRT7P08729 469 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 PYGMP11217 842 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 GPD1P21695 349 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 PTPN7P35236 360 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 SSR1P43307 286 aaKnown RBP12.57□□□□□ -0.4
LMNA-224ENST00000515711 PLA2G4AP47712 749 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 FNTAP49354 379 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 PLCB3Q01970 1234 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 ZNF252P-AS1Q0IIN9 211 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 CYP1B1Q16678 543 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 WSCD1Q658N2 575 aa12.57□□□□□ -0.4
LMNA-224ENST00000515711 OR6B2Q6IFH4 312 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms