RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	FAM136A	Q96C01	138 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	ZNF778	Q96MU6	729 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	WDCP	Q9H6R7	721 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	DKK3	Q9UBP4	350 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	ABCF2	Q9UG63	623 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	RAD54B	Q9Y620	910 aa		5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	CFAP65	Q6ZU64	1925 aa	Known RBP	5.7	□□□□□ -1.5
RUFY3-215	ENST00000515479	DHX29	Q7Z478	1369 aa	Known RBP	5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	SBNO2	Q9Y2G9	1366 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479		M0QYG6	137 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	KIF3B	O15066	747 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	GNAI2	P04899	355 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	EIF2B5	Q13144	721 aa	Known RBP	5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	NOG	Q13253	232 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	BMPR2	Q13873	1038 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	LLGL1	Q15334	1064 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	THEMIS2	Q5TEJ8	643 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	HEATR3	Q7Z4Q2	680 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	SCARB1	Q8WTV0	552 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	C1QTNF7	Q9BXJ2	289 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	ZNF70	Q9UC06	446 aa	Predicted RBP	5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	CFDP1	Q9UEE9	299 aa	Predicted RBP	5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	NKTR	P30414	1462 aa	Known RBP	5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	SRCAP	Q6ZRS2	3230 aa		5.69	□□□□□ -1.5
RUFY3-215	ENST00000515479	TMEM94	Q12767	1356 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	COL16A1	Q07092	1604 aa	Predicted RBP	5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	NXPH3	O95157	252 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	NDUFB7	P17568	137 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	GCLC	P48506	637 aa	Predicted RBP	5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	RBM6	P78332	1123 aa	Known RBP	5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	GRM1	Q13255	1194 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	TEDDM1	Q5T9Z0	273 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	VPS53	Q5VIR6	699 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	ZNF551	Q7Z340	670 aa	Predicted RBP	5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	C1QL2	Q7Z5L3	287 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	CPA6	Q8N4T0	437 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	SEMA6D	Q8NFY4	1073 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	KLHDC4	Q8TBB5	520 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	ATRIP	Q8WXE1	791 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	ZDHHC8	Q9ULC8	765 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	KDM5A	P29375	1690 aa	Known RBP	5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	SLIT1	O75093	1534 aa		5.68	□□□□□ -1.5
RUFY3-215	ENST00000515479	NCOA2	Q15596	1464 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	SLC16A6	O15403	523 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	FTL	P02792	175 aa	Predicted RBP	5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	PDHA1	P08559	390 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	PDC	P20941	246 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	PCSK6	P29122	969 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	RECQL	P46063	649 aa	Predicted RBP	5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	TOB1	P50616	345 aa	Predicted RBP	5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	HK3	P52790	923 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	TFF2	Q03403	129 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	PPP1R32	Q7Z5V6	425 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	USP37	Q86T82	979 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	FAM109A	Q8N4B1	249 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	VGLL2	Q8N8G2	317 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	DDX17	Q92841	729 aa	Known RBP	5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	MRPL46	Q9H2W6	279 aa	Known RBP	5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	WDR26	Q9H7D7	661 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	ARHGEF3	Q9NR81	526 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	SERTAD4	Q9NUC0	356 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	LMBRD1	Q9NUN5	540 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	FLRT1	Q9NZU1	646 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	SERGEF	Q9UGK8	458 aa		5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	PRDM15	P57071	1507 aa	Predicted RBP	5.67	□□□□□ -1.5
RUFY3-215	ENST00000515479	LRP5	O75197	1615 aa		5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	GPATCH8	Q9UKJ3	1502 aa	Known RBP	5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	TARM1	B6A8C7	271 aa		5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	SNUPN	O95149	360 aa	Known RBP	5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	TCF15	Q12870	199 aa		5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	ZNF618	Q5T7W0	954 aa		5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	TMEM108	Q6UXF1	575 aa		5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	ASPSCR1	Q9BZE9	553 aa		5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	SERHL	Q9NQF3	203 aa		5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	SH3BP4	Q9P0V3	963 aa		5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	AHDC1	Q5TGY3	1603 aa	Predicted RBP	5.66	□□□□□ -1.5
RUFY3-215	ENST00000515479	MYOM3	Q5VTT5	1437 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	NCOA3	Q9Y6Q9	1424 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	ARHGAP23	Q9P227	1491 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	PPM1D	O15297	605 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	AHSG	P02765	367 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	JUP	P14923	745 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	FAM160B1	Q5W0V3	765 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	CEP85	Q6P2H3	762 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	USP45	Q70EL2	814 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	SLC29A4	Q7RTT9	530 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	PPP1R3B	Q86XI6	285 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	FAM46D	Q8NEK8	389 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	PCDHA1	Q9Y5I3	950 aa		5.65	□□□□□ -1.5
RUFY3-215	ENST00000515479	LRP6	O75581	1613 aa		5.65	□□□□□ -1.51
RUFY3-215	ENST00000515479	EIF2AK4	Q9P2K8	1649 aa	Known RBP	5.65	□□□□□ -1.51
RUFY3-215	ENST00000515479	AFF2	P51816	1311 aa		5.65	□□□□□ -1.51
RUFY3-215	ENST00000515479	RAB3GAP2	Q9H2M9	1393 aa		5.65	□□□□□ -1.51
RUFY3-215	ENST00000515479	ERVK-7	P63135	1459 aa		5.64	□□□□□ -1.51
RUFY3-215	ENST00000515479	NWD1	Q149M9	1564 aa		5.64	□□□□□ -1.51
RUFY3-215	ENST00000515479	PRR35	P0CG20	571 aa		5.64	□□□□□ -1.51

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