RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 YAF2Q8IY57 180 aa12.25□□□□□ -0.45
VCAN-212ENST00000515397 C12orf29Q8N999 325 aa12.25□□□□□ -0.45
VCAN-212ENST00000515397 RIN3Q8TB24 985 aa12.25□□□□□ -0.45
VCAN-212ENST00000515397 SPATA18Q8TC71 538 aa12.25□□□□□ -0.45
VCAN-212ENST00000515397 TWNKQ96RR1 684 aa12.25□□□□□ -0.45
VCAN-212ENST00000515397 SLC22A12Q96S37 553 aa12.25□□□□□ -0.45
VCAN-212ENST00000515397 KCNK16Q96T55 309 aa12.25□□□□□ -0.45
VCAN-212ENST00000515397 GPR88Q9GZN0 384 aa12.25□□□□□ -0.45
VCAN-212ENST00000515397 TRPV4Q9HBA0 871 aa12.25□□□□□ -0.45
VCAN-212ENST00000515397 HOOK1Q9UJC3 728 aaKnown RBP12.25□□□□□ -0.45
VCAN-212ENST00000515397 NDRG2Q9UN36 371 aaKnown RBP12.25□□□□□ -0.45
VCAN-212ENST00000515397 SIT1Q9Y3P8 196 aa12.25□□□□□ -0.45
VCAN-212ENST00000515397 C2orf78A6NCI8 922 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 MAPK13O15264 365 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 GALR2O43603 387 aaPredicted RBP12.24□□□□□ -0.45
VCAN-212ENST00000515397 NOL4O94818 638 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 ABL1P00519 1130 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 EPB41P11171 864 aaKnown RBP12.24□□□□□ -0.45
VCAN-212ENST00000515397 CCDC130P13994 396 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 MAGEA11P43364 429 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 ASPAP45381 313 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 STARD6P59095 220 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 PFKPQ01813 784 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 MAPRE1Q15691 268 aaKnown RBP12.24□□□□□ -0.45
VCAN-212ENST00000515397 EDRF1Q3B7T1 1238 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 DCAF17Q5H9S7 520 aaPredicted RBP12.24□□□□□ -0.45
VCAN-212ENST00000515397 ALYREFQ86V81 257 aaKnown RBP12.24□□□□□ -0.45
VCAN-212ENST00000515397 CMTM8Q8IZV2 173 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 DTWD2Q8NBA8 298 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 MRPS31Q92665 395 aaKnown RBP12.24□□□□□ -0.45
VCAN-212ENST00000515397 ATOH1Q92858 354 aaPredicted RBP12.24□□□□□ -0.45
VCAN-212ENST00000515397 USP13Q92995 863 aaPredicted RBP12.24□□□□□ -0.45
VCAN-212ENST00000515397 TATDN2Q93075 761 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 FUBP3Q96I24 572 aaKnown RBP eCLIP12.24□□□□□ -0.45
VCAN-212ENST00000515397 TSG101Q99816 390 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 DUSP9Q99956 384 aaKnown RBP12.24□□□□□ -0.45
VCAN-212ENST00000515397 VRTNQ9H8Y1 702 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 FAM49BQ9NUQ9 324 aa12.24□□□□□ -0.45
VCAN-212ENST00000515397 KANSL1LA0AUZ9 987 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 BEST1O76090 585 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 FGF19O95750 216 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 FAM163BP0C2L3 166 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 CCNE1P24864 410 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 TARSP26639 723 aaKnown RBP12.23□□□□□ -0.45
VCAN-212ENST00000515397 ANXA13P27216 316 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 AVPR1AP37288 418 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 NOP14P78316 857 aaKnown RBP12.23□□□□□ -0.45
VCAN-212ENST00000515397 FKBP3Q00688 224 aaKnown RBP12.23□□□□□ -0.45
VCAN-212ENST00000515397 LRMPQ12912 555 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 MORC3Q14149 939 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 CBWD6Q4V339 395 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 ZNF394Q53GI3 561 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 CBWD3Q5JTY5 395 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 CBWD5Q5RIA9 395 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 TRIM68Q6AZZ1 485 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 PHLDB3Q6NSJ2 640 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 VSTM1Q6UX27 236 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 MON1AQ86VX9 555 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 ARL14EPQ8N8R7 260 aaPredicted RBP12.23□□□□□ -0.45
VCAN-212ENST00000515397 PJA1Q8NG27 643 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 SCAMP5Q8TAC9 235 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 NELFBQ8WX92 580 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 IRF7Q92985 503 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 JAKMIP2Q96AA8 810 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 SHDQ96IW2 340 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 TMEM8AQ9HCN3 771 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 GKN1Q9NS71 199 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 GTSE1Q9NYZ3 720 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 DLGAP2Q9P1A6 1054 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 CHORDC1Q9UHD1 332 aaPredicted RBP12.23□□□□□ -0.45
VCAN-212ENST00000515397 CTNND2Q9UQB3 1225 aa12.23□□□□□ -0.45
VCAN-212ENST00000515397 ARIH1Q9Y4X5 557 aaPredicted RBP12.23□□□□□ -0.45
VCAN-212ENST00000515397 CACNA1IQ9P0X4 2223 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 DMDP11532 3685 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 SCAMP3O14828 347 aaKnown RBP12.22□□□□□ -0.45
VCAN-212ENST00000515397 AP1G2O75843 785 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 P4HA1P13674 534 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 ADORA2BP29275 332 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 MXI1P50539 228 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 KPNA1P52294 538 aaPredicted RBP12.22□□□□□ -0.45
VCAN-212ENST00000515397 PTPN5P54829 565 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 UBE2HP62256 183 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 PRKCQQ04759 706 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 COBLL1Q53SF7 1204 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 KRT39Q6A163 491 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 ZNF852Q6ZMS4 543 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 DENND5BQ6ZUT9 1274 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 FAM35AQ86V20 835 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 ELOA2Q8IYF1 753 aaPredicted RBP12.22□□□□□ -0.45
VCAN-212ENST00000515397 CCDC105Q8IYK2 499 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 FUKQ8N0W3 1084 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 SLC2A14Q8TDB8 520 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 BPIFB1Q8TDL5 484 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 WHAMMQ8TF30 809 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 DEPDC1BQ8WUY9 529 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 SPATA17Q96L03 361 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 MYRFLQ96LU7 910 aa12.22□□□□□ -0.45
VCAN-212ENST00000515397 ARID3AQ99856 593 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms