RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SH2D3CQ8N5H7 860 aa7.83□□□□□ -1.16
PDLIM5-219ENST00000514743 MYCT1Q8N699 235 aa7.83□□□□□ -1.16
PDLIM5-219ENST00000514743 LRRC57Q8N9N7 239 aa7.83□□□□□ -1.16
PDLIM5-219ENST00000514743 SPACA7Q96KW9 195 aa7.83□□□□□ -1.16
PDLIM5-219ENST00000514743 MXRA8Q9BRK3 442 aa7.83□□□□□ -1.16
PDLIM5-219ENST00000514743 AIFM2Q9BRQ8 373 aa7.83□□□□□ -1.16
PDLIM5-219ENST00000514743 SYT11Q9BT88 431 aa7.83□□□□□ -1.16
PDLIM5-219ENST00000514743 NEK6Q9HC98 313 aa7.83□□□□□ -1.16
PDLIM5-219ENST00000514743 VTA1Q9NP79 307 aa7.83□□□□□ -1.16
PDLIM5-219ENST00000514743 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.83□□□□□ -1.164e-8■■■■□ 25.7
PDLIM5-219ENST00000514743 SIP14410 1827 aa7.83□□□□□ -1.16
PDLIM5-219ENST00000514743 ZSCAN5CA6NGD5 496 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 NFIBO00712 420 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 WNT10BO00744 389 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 ADCY3O60266 1144 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 FAM13AO94988 1023 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 ICAM1P05362 532 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 TNFRSF8P28908 595 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 PCYT1AP49585 367 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 DHX9Q08211 1270 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 SPP2Q13103 211 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 AMHR2Q16671 573 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 KCTD21Q4G0X4 260 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CBWD6Q4V339 395 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CBWD3Q5JTY5 395 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CBWD5Q5RIA9 395 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 DTX3Q8N9I9 347 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 MDM1Q8TC05 714 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 SEC16BQ96JE7 1060 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 TEPSINQ96N21 525 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 WDR11Q9BZH6 1224 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 SHCBP1LQ9BZQ2 653 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 AGPAT3Q9NRZ7 376 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 SEPT11Q9NVA2 429 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 THAP1Q9NVV9 213 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 KCND2Q9NZV8 630 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 TSKSQ9UJT2 592 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 PCDHGA8Q9Y5G5 932 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 ZSCAN5BA6NJL1 495 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 DPEP1P16444 411 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 RXRBP28702 533 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 EIF2B2P49770 351 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 ALDH5A1P51649 535 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 DCTN2Q13561 401 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CDONQ4KMG0 1287 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CMPK2Q5EBM0 449 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 IL23RQ5VWK5 629 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CHADLQ6NUI6 762 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CYP4V2Q6ZWL3 525 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 AGBL3Q8NEM8 1001 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CEP70Q8NHQ1 597 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 SLC30A5Q8TAD4 765 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 LNX1Q8TBB1 728 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 DIS3LQ8TF46 1054 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 PAWRQ96IZ0 340 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 NACC1Q96RE7 527 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 COQ7Q99807 217 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 MKNK1Q9BUB5 465 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 GOLPH3Q9H4A6 298 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 STK32BQ9NY57 414 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 SELENONQ9NZV5 590 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 TMEM59LQ9UK28 342 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 LZTS1Q9Y250 596 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 HBS1LQ9Y450 684 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 SNX9Q9Y5X1 595 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 DDX3XO00571 662 aaKnown RBP eCLIP7.82□□□□□ -1.166e-11■■□□□ 12.7
PDLIM5-219ENST00000514743 ICMTO60725 284 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 RNGTTO60942 597 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 EGFRP00533 1210 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 NQO1P15559 274 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CTRB1P17538 263 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 PSMC2P35998 433 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 RAD23BP54727 409 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 MRPS9P82933 396 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CTRB2Q6GPI1 263 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 KDM7AQ6ZMT4 941 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 BTN2A1Q7KYR7 527 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 ZNF467Q7Z7K2 595 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 GOT1L1Q8NHS2 421 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 DNAJC9Q8WXX5 260 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CCT6BQ92526 530 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 RIT2Q99578 217 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 HAUS8Q9BT25 410 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 TEKT3Q9BXF9 490 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 KCNH7Q9NS40 1196 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CLIC5Q9NZA1 410 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 STIM2Q9P246 746 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 CTTNBP2NLQ9P2B4 639 aa7.82□□□□□ -1.16
PDLIM5-219ENST00000514743 TRAV6A0A075B6T7 132 aa7.81□□□□□ -1.16
PDLIM5-219ENST00000514743 SNPHO15079 494 aa7.81□□□□□ -1.16
PDLIM5-219ENST00000514743 CBFA2T3O75081 653 aa7.81□□□□□ -1.16
PDLIM5-219ENST00000514743 INMTO95050 263 aa7.81□□□□□ -1.16
PDLIM5-219ENST00000514743 TFPTP0C1Z6 253 aa7.81□□□□□ -1.16
PDLIM5-219ENST00000514743 FMO5P49326 533 aa7.81□□□□□ -1.16
PDLIM5-219ENST00000514743 PRKCEQ02156 737 aa7.81□□□□□ -1.16
PDLIM5-219ENST00000514743 CXCL9Q07325 125 aa7.81□□□□□ -1.16
PDLIM5-219ENST00000514743 REM2Q8IYK8 340 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-219ENST00000514743 LMO3Q8TAP4 145 aa7.81□□□□□ -1.16
PDLIM5-219ENST00000514743 FNDC8Q8TC99 324 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms