RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 VAMP7P51809 220 aa24.58■■□□□ 1.53
CLDND1-230ENST00000514537 CDH8P55286 799 aa24.58■■□□□ 1.53
CLDND1-230ENST00000514537 FAM160A1Q05DH4 1040 aa24.58■■□□□ 1.53
CLDND1-230ENST00000514537 ADAM9Q13443 819 aa24.58■■□□□ 1.53
CLDND1-230ENST00000514537 SGSM1Q2NKQ1 1148 aa24.58■■□□□ 1.53
CLDND1-230ENST00000514537 SMYD3Q9H7B4 428 aa24.58■■□□□ 1.53
CLDND1-230ENST00000514537 DMDP11532 3685 aa24.57■■□□□ 1.52
CLDND1-230ENST00000514537 AVPR1AP37288 418 aa24.57■■□□□ 1.52
CLDND1-230ENST00000514537 MCCD1P59942 119 aaPredicted RBP24.57■■□□□ 1.52
CLDND1-230ENST00000514537 ENPEPQ07075 957 aa24.57■■□□□ 1.52
CLDND1-230ENST00000514537 INTS8Q75QN2 995 aaKnown RBP24.57■■□□□ 1.52
CLDND1-230ENST00000514537 SMYD4Q8IYR2 804 aaPredicted RBP24.57■■□□□ 1.52
CLDND1-230ENST00000514537 CSGALNACT1Q8TDX6 532 aa24.57■■□□□ 1.52
CLDND1-230ENST00000514537 FAM3CQ92520 227 aa24.57■■□□□ 1.52
CLDND1-230ENST00000514537 TAF4BQ92750 862 aa24.57■■□□□ 1.52
CLDND1-230ENST00000514537 ELMO3Q96BJ8 720 aa24.57■■□□□ 1.52
CLDND1-230ENST00000514537 TIGD1Q96MW7 591 aa24.57■■□□□ 1.52
CLDND1-230ENST00000514537 GSDMAQ96QA5 445 aa24.57■■□□□ 1.52
CLDND1-230ENST00000514537 RMND1Q9NWS8 449 aa24.57■■□□□ 1.52
CLDND1-230ENST00000514537 TRIM66O15016 1216 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 PSMC2P35998 433 aaKnown RBP24.56■■□□□ 1.52
CLDND1-230ENST00000514537 RPS9P46781 194 aaKnown RBP24.56■■□□□ 1.52
CLDND1-230ENST00000514537 PLCB2Q00722 1185 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 EDRF1Q3B7T1 1238 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 FAM186BQ8IYM0 893 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 B3GALNT2Q8NCR0 500 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 SPATA20Q8TB22 786 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 USP13Q92995 863 aaPredicted RBP24.56■■□□□ 1.52
CLDND1-230ENST00000514537 ZFYVE19Q96K21 471 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 C8orf48Q96LL4 319 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 SDCBP2Q9H190 292 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 TDP1Q9NUW8 608 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 CCL26Q9Y258 94 aa24.56■■□□□ 1.52
CLDND1-230ENST00000514537 ASS1P00966 412 aaKnown RBP24.55■■□□□ 1.52
CLDND1-230ENST00000514537 ANXA13P27216 316 aa24.55■■□□□ 1.52
CLDND1-230ENST00000514537 RAP1GAPP47736 663 aa24.55■■□□□ 1.52
CLDND1-230ENST00000514537 ZNF268Q14587 947 aaPredicted RBP24.55■■□□□ 1.52
CLDND1-230ENST00000514537 ZNF658Q5TYW1 1059 aaPredicted RBP24.55■■□□□ 1.52
CLDND1-230ENST00000514537 DENND5BQ6ZUT9 1274 aa24.55■■□□□ 1.52
CLDND1-230ENST00000514537 FRMD5Q7Z6J6 570 aa24.55■■□□□ 1.52
CLDND1-230ENST00000514537 MAML2Q8IZL2 1156 aaPredicted RBP24.55■■□□□ 1.52
CLDND1-230ENST00000514537 MSANTD3Q96H12 275 aa24.55■■□□□ 1.52
CLDND1-230ENST00000514537 B3GNT5Q9BYG0 378 aa24.55■■□□□ 1.52
CLDND1-230ENST00000514537 C8orf33Q9H7E9 229 aaPredicted RBP24.55■■□□□ 1.52
CLDND1-230ENST00000514537 THG1LQ9NWX6 298 aaKnown RBP24.55■■□□□ 1.52
CLDND1-230ENST00000514537 F8VP50 259 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 CLSTN1O94985 981 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 SMC2O95347 1197 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 HLA-DRAP01903 254 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 TRIM49P0CI25 452 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 TRIM49CP0CI26 452 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 KRT13P13646 458 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 P4HA1P13674 534 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 CCNE1P24864 410 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 PRCPP42785 496 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 PPP3CAQ08209 521 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 COBLL1Q53SF7 1204 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 C1orf228Q6PIY5 440 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 SCARA5Q6ZMJ2 495 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 ZNF518BQ9C0D4 1074 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 ELOVL4Q9GZR5 314 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 KIF9Q9HAQ2 790 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 SPATA6Q9NWH7 488 aaPredicted RBP24.54■■□□□ 1.52
CLDND1-230ENST00000514537 GTSE1Q9NYZ3 720 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 NDRG2Q9UN36 371 aaKnown RBP24.54■■□□□ 1.52
CLDND1-230ENST00000514537 PCDHA5Q9Y5H7 936 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 CACNA1IQ9P0X4 2223 aa24.54■■□□□ 1.52
CLDND1-230ENST00000514537 SP9P0CG40 484 aa24.53■■□□□ 1.52
CLDND1-230ENST00000514537 GCLMP48507 274 aa24.53■■□□□ 1.52
CLDND1-230ENST00000514537 KPNA1P52294 538 aaPredicted RBP24.53■■□□□ 1.52
CLDND1-230ENST00000514537 CACNA2D1P54289 1103 aa24.53■■□□□ 1.52
CLDND1-230ENST00000514537 USP46P62068 366 aa24.53■■□□□ 1.52
CLDND1-230ENST00000514537 NOP14P78316 857 aaKnown RBP24.53■■□□□ 1.52
CLDND1-230ENST00000514537 ELOA2Q8IYF1 753 aaPredicted RBP24.53■■□□□ 1.52
CLDND1-230ENST00000514537 TNIP3Q96KP6 325 aa24.53■■□□□ 1.52
CLDND1-230ENST00000514537 FAM83CQ9BQN1 747 aa24.53■■□□□ 1.52
CLDND1-230ENST00000514537 TTLL2Q9BWV7 592 aa24.53■■□□□ 1.52
CLDND1-230ENST00000514537 TMEM30AQ9NV96 361 aa24.53■■□□□ 1.52
CLDND1-230ENST00000514537 EHD2Q9NZN4 543 aa24.53■■□□□ 1.52
CLDND1-230ENST00000514537 COL4A2P08572 1712 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 CLDN5O00501 218 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 GFRA3O60609 400 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 PIK3CAP42336 1068 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 ASPAP45381 313 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 SOX9P48436 509 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 SPOPLQ6IQ16 392 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 RALGPS2Q86X27 583 aaPredicted RBP24.52■■□□□ 1.52
CLDND1-230ENST00000514537 TAS1R2Q8TE23 839 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 ERCC4Q92889 916 aaPredicted RBP24.52■■□□□ 1.52
CLDND1-230ENST00000514537 SMARCE1Q969G3 411 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 SLC22A12Q96S37 553 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 CYP2S1Q96SQ9 504 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 TRPC7Q9HCX4 862 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 GKN1Q9NS71 199 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 GCNT4Q9P109 453 aa24.52■■□□□ 1.52
CLDND1-230ENST00000514537 HOOK1Q9UJC3 728 aaKnown RBP24.52■■□□□ 1.52
CLDND1-230ENST00000514537 NUP210Q8TEM1 1887 aaPredicted RBP24.51■■□□□ 1.51
CLDND1-230ENST00000514537 TRAV19A0A0A6YYK7 116 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 SPECC1L-ADORA2AF8WAN1 911 aa24.51■■□□□ 1.51
CLDND1-230ENST00000514537 CETN3O15182 167 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms