RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 CDHR5Q9HBB8 845 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 SNTG2Q9NY99 539 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 SAE1Q9UBE0 346 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-211ENST00000514439 CTNNAL1Q9UBT7 734 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 PCSK1NQ9UHG2 260 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 EFR3BQ9Y2G0 817 aa8.62□□□□□ -1.03
CPNE4-211ENST00000514439 SLC15A5A6NIM6 579 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 E5RJQ4 531 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 SGK1O00141 431 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 PIK3R2O00459 728 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 DYNC1LI2O43237 492 aaPredicted RBP8.61□□□□□ -1.03
CPNE4-211ENST00000514439 CST8O60676 142 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 GPR32O75388 356 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 TCEA3O75764 348 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 IFNB1P01574 187 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 PFKMP08237 780 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 OTUD4Q01804 1114 aaKnown RBP8.61□□□□□ -1.03
CPNE4-211ENST00000514439 TAF5Q15542 800 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 TAZQ16635 292 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 PRAMEF19Q5SWL8 479 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 SLC27A1Q6PCB7 646 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 FAM183BPQ6ZVS7 135 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 BBS12Q6ZW61 710 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 TAOK1Q7L7X3 1001 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 EXOC3L1Q86VI1 746 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 SPATS2Q86XZ4 545 aaKnown RBP8.61□□□□□ -1.03
CPNE4-211ENST00000514439 TTC39CQ8N584 583 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 C12orf29Q8N999 325 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 ACTL9Q8TC94 416 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 KAT2BQ92831 832 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 LENG1Q96BZ8 264 aaPredicted RBP8.61□□□□□ -1.03
CPNE4-211ENST00000514439 PIWIL1Q96J94 861 aaKnown RBP8.61□□□□□ -1.03
CPNE4-211ENST00000514439 OSMRQ99650 979 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 GCOM2Q9BZD3 368 aaPredicted RBP8.61□□□□□ -1.03
CPNE4-211ENST00000514439 FAM124BQ9H5Z6 455 aaPredicted RBP8.61□□□□□ -1.03
CPNE4-211ENST00000514439 PLEKHA5Q9HAU0 1116 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 PCDH9Q9HC56 1237 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 ASNSD1Q9NWL6 643 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 TUBGCP4Q9UGJ1 667 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 USP18Q9UMW8 372 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 HES2Q9Y543 173 aa8.61□□□□□ -1.03
CPNE4-211ENST00000514439 C5orf60A6NFR6 353 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 A6NJR5 290 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 RNF8O76064 485 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 CELF2O95319 508 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 TRUB2O95900 331 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 F2P00734 622 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 PECAM1P16284 738 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 MAGEA4P43358 317 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 ZNF143P52747 638 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 PDE4CQ08493 712 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 MORF4L2Q15014 288 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 ACAP1Q15027 740 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 GOLGA7BQ2TAP0 167 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 GLRA4Q5JXX5 417 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 RNASEH2BQ5TBB1 312 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 OR6B2Q6IFH4 312 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 CYP4F22Q6NT55 531 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 TRNP1Q6NT89 227 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 NOTUMQ6P988 496 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 APBB1IPQ7Z5R6 666 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 C2orf69Q8N8R5 385 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 KCTD6Q8NC69 237 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 HSPH1Q92598 858 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 ARHGEF2Q92974 986 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 PEBP4Q96S96 227 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 MRPL45Q9BRJ2 306 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 SAYSD1Q9NPB0 183 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 INTS9Q9NV88 658 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 DDX20Q9UHI6 824 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 CPA4Q9UI42 421 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 KIAA1257Q9ULG3 409 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 TPX2Q9ULW0 747 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 DERAQ9Y315 318 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 SNX9Q9Y5X1 595 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 NRCAMQ92823 1304 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 ATXN2Q99700 1313 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 MBLAC1A4D2B0 266 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 C2CD4BA6NLJ0 364 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 CYP2C9P11712 490 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 DARSP14868 501 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 GPD1P21695 349 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 DRD4P21917 467 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 PCK1P35558 622 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 RGS7P49802 495 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 YARSP54577 528 aaKnown RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 GDF10P55107 478 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 IRX5P78411 483 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 STILQ15468 1287 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 RAB6CQ53S08 254 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 PPP1R26Q5T8A7 1209 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 SH3PXD2AQ5TCZ1 1133 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 CHADLQ6NUI6 762 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 CEP128Q6ZU80 1094 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 MICALCLQ6ZW33 695 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 ACOT1Q86TX2 421 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 TTC13Q8NBP0 860 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 CMASQ8NFW8 434 aaPredicted RBP8.6□□□□□ -1.03
CPNE4-211ENST00000514439 RXFP2Q8WXD0 754 aa8.6□□□□□ -1.03
CPNE4-211ENST00000514439 C18orf25Q96B23 403 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms