RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 DDX43Q9NXZ2 648 aaKnown RBP13.54□□□□□ -0.24
PVT1-203ENST00000513868 HESX1Q9UBX0 185 aa13.54□□□□□ -0.24
PVT1-203ENST00000513868 TIMM13Q9Y5L4 95 aaPredicted RBP13.54□□□□□ -0.24
PVT1-203ENST00000513868 PATJQ8NI35 1801 aa13.54□□□□□ -0.24
PVT1-203ENST00000513868 BHMG1C9JSJ3 638 aaPredicted RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 I3L4J1 428 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 ENPP3O14638 875 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 DDHD2O94830 711 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 ITGB1P05556 798 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 MYBL2P10244 700 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 BCAT1P54687 386 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 DSC1Q08554 894 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 BST2Q10589 180 aaKnown RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 ATP13A4Q4VNC1 1196 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 BEND6Q5SZJ8 279 aaPredicted RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 TXNRD3NBQ6F5E7 133 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 CCDC70Q6NSX1 233 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 OLFML1Q6UWY5 402 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 DSTYKQ6XUX3 929 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 CCNI2Q6ZMN8 369 aaPredicted RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 PRELID2Q8N945 189 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 IPO4Q8TEX9 1081 aaKnown RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 RUBCNQ92622 972 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 UROC1Q96N76 676 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 RTP3Q9BQQ7 232 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 CRTAC1Q9NQ79 661 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 STIM2Q9P246 746 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
PVT1-203ENST00000513868 ZNF638Q14966 1978 aaKnown RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 ZSCAN5CA6NGD5 496 aaPredicted RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 F8W810 466 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 M0QZQ0 153 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 FSCN2O14926 492 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 PAPSS1O43252 624 aaPredicted RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 B3GAT3O94766 335 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 CYP11A1P05108 521 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 PSMA2P25787 234 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 BRCC3P46736 316 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 LHX1P48742 406 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 PAN2Q504Q3 1202 aaKnown RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 FAM102AQ5T9C2 384 aaPredicted RBP13.53□□□□□ -0.24
PVT1-203ENST00000513868 LRRC38Q5VT99 294 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 OR6B2Q6IFH4 312 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 DCLRE1AQ6PJP8 1040 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 TMCO3Q6UWJ1 677 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 GLB1LQ6UWU2 654 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 ANKS1BQ7Z6G8 1248 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 SCUBE3Q8IX30 993 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 CRIPAKQ8N1N5 446 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 DNAJC5GQ8N7S2 189 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 ZNF333Q96JL9 665 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 B3GNT5Q9BYG0 378 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 MIS12Q9H081 205 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 SLITRK6Q9H5Y7 841 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 ARFGAP3Q9NP61 516 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 GDF3Q9NR23 364 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
PVT1-203ENST00000513868 C2CD4BA6NLJ0 364 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 CLDN5O00501 218 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 LRCH4O75427 683 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 RARAP10276 462 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 COL6A1P12109 1028 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 PLA2G4AP47712 749 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 SLC25A11Q02978 314 aaKnown RBP13.52□□□□□ -0.25
PVT1-203ENST00000513868 TAF5Q15542 800 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 CYP1B1Q16678 543 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 NOMO2Q5JPE7 1267 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 MTERF4Q7Z6M4 381 aaKnown RBP13.52□□□□□ -0.25
PVT1-203ENST00000513868 COLGALT2Q8IYK4 626 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 EXD1Q8NHP7 514 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 DUSP16Q9BY84 665 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 DNAI2Q9GZS0 605 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 ELAC1Q9H777 363 aaKnown RBP13.52□□□□□ -0.25
PVT1-203ENST00000513868 CYLDQ9NQC7 956 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 AMACRQ9UHK6 382 aa13.52□□□□□ -0.25
PVT1-203ENST00000513868 KIAA0100Q14667 2235 aaKnown RBP13.51□□□□□ -0.25
PVT1-203ENST00000513868 LTBP2Q14767 1821 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 MYBPHLA2RUH7 354 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 XPO1O14980 1071 aaKnown RBP13.51□□□□□ -0.25
PVT1-203ENST00000513868 BEST1O76090 585 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 HEXIM1O94992 359 aaKnown RBP13.51□□□□□ -0.25
PVT1-203ENST00000513868 PAX3P23760 479 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 MCM3P25205 808 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 IL1R2P27930 398 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 TNFRSF8P28908 595 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 FLT3P36888 993 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 ZNF143P52747 638 aaPredicted RBP13.51□□□□□ -0.25
PVT1-203ENST00000513868 SLC6A3Q01959 620 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 PLCB3Q01970 1234 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 KLF1Q13351 362 aaPredicted RBP13.51□□□□□ -0.25
PVT1-203ENST00000513868 LLGL1Q15334 1064 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 TRADDQ15628 312 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 MDH1BQ5I0G3 518 aa13.51□□□□□ -0.25
PVT1-203ENST00000513868 SPATA18Q8TC71 538 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 668.8 ms