RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 OBP2AQ9NY56 170 aa12.34□□□□□ -0.43
ARHGEF28-213ENST00000513841 EHD2Q9NZN4 543 aa12.34□□□□□ -0.43
ARHGEF28-213ENST00000513841 CHMP5Q9NZZ3 219 aa12.34□□□□□ -0.43
ARHGEF28-213ENST00000513841 MTF2Q9Y483 593 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF28-213ENST00000513841 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 TRIM49P0CI25 452 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 TRIM49CP0CI26 452 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 GLULP15104 373 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 DDX6P26196 483 aaKnown RBP eCLIP12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 GTF2H1P32780 548 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 PIK3CAP42336 1068 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 RAP1GAPP47736 663 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 FKBP3Q00688 224 aaKnown RBP12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 PPP3CAQ08209 521 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 STIM1Q13586 685 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 ZCWPW2Q504Y3 356 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 ARHGAP29Q52LW3 1261 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 COBLL1Q53SF7 1204 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 DENND5BQ6ZUT9 1274 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 ALYREFQ86V81 257 aaKnown RBP12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 ADSSL1Q8N142 457 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 CCDC150Q8NCX0 1101 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 PJA1Q8NG27 643 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 BPIFB1Q8TDL5 484 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 TRMT2BQ96GJ1 504 aaKnown RBP12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 DHTKD1Q96HY7 919 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 CYP2S1Q96SQ9 504 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 MED10Q9BTT4 135 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 B3GNT5Q9BYG0 378 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 BCO2Q9BYV7 579 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 IMPG2Q9BZV3 1241 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 SMG9Q9H0W8 520 aaKnown RBP12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 SDCBP2Q9H190 292 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 DPEP3Q9H4B8 488 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 SMYD3Q9H7B4 428 aa12.33□□□□□ -0.44
ARHGEF28-213ENST00000513841 CLDN5O00501 218 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 TRIM66O15016 1216 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 STX10O60499 249 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 LRRN2O75325 713 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 HDCP19113 662 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 KPNA1P52294 538 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 MCCD1P59942 119 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 FCHO2Q0JRZ9 810 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 KRT39Q6A163 491 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 SPOPLQ6IQ16 392 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 SCARA5Q6ZMJ2 495 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 ACOT1Q86TX2 421 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 CRYBG2Q8N1P7 616 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 TAS1R2Q8TE23 839 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 FAM3CQ92520 227 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 ZNF518BQ9C0D4 1074 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 ELOVL4Q9GZR5 314 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 LTB4R2Q9NPC1 389 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 GKN1Q9NS71 199 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 TDP1Q9NUW8 608 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 FAM86C1Q9NVL1 165 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 MAN1B1Q9UKM7 699 aa12.32□□□□□ -0.44
ARHGEF28-213ENST00000513841 TRAV19A0A0A6YYK7 116 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 F8VP50 259 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 PSMA7O14818 248 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 PRAMEF12O95522 483 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 ABL1P00519 1130 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 TRIM21P19474 475 aaKnown RBP12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 CCNE1P24864 410 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 PPP1R2P41236 205 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 NDST1P52848 882 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 MLLT6P55198 1093 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 PLCB2Q00722 1185 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 LRRC63Q05C16 580 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 ANGPT1Q15389 498 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 CC2D1AQ6P1N0 951 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 UNC93AQ86WB7 457 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 C1orf210Q8IVY1 113 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 TTC8Q8TAM2 541 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 USP13Q92995 863 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 ZFYVE19Q96K21 471 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 KCNK16Q96T55 309 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 PHOX2BQ99453 314 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 DNAI2Q9GZS0 605 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 C8orf33Q9H7E9 229 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 LMAN1LQ9HAT1 526 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 CYP3A43Q9HB55 503 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 TMEM8AQ9HCN3 771 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 TRPC7Q9HCX4 862 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 DLGAP2Q9P1A6 1054 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 NDRG2Q9UN36 371 aaKnown RBP12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 PIAS3Q9Y6X2 628 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 CACNA1HO95180 2353 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 ATP8B3O60423 1300 aa12.31□□□□□ -0.44
ARHGEF28-213ENST00000513841 F5P12259 2224 aa12.3□□□□□ -0.44
ARHGEF28-213ENST00000513841 USP17L7P0C7H9 530 aa12.3□□□□□ -0.44
ARHGEF28-213ENST00000513841 YWHAQP27348 245 aa12.3□□□□□ -0.44
ARHGEF28-213ENST00000513841 HOXD11P31277 338 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF28-213ENST00000513841 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
ARHGEF28-213ENST00000513841 ASPAP45381 313 aa12.3□□□□□ -0.44
ARHGEF28-213ENST00000513841 PPP3CCP48454 512 aa12.3□□□□□ -0.44
ARHGEF28-213ENST00000513841 MRE11P49959 708 aa12.3□□□□□ -0.44
ARHGEF28-213ENST00000513841 PMS1P54277 932 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms