RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 GOLGA7BQ2TAP0 167 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 PPP1R26Q5T8A7 1209 aaPredicted RBP10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 C4orf50Q6ZRC1 276 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 CCDC149Q6ZUS6 474 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 GRASPQ7Z6J2 395 aaPredicted RBP10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 TCEAL8Q8IYN2 117 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 SMRP1Q8NCR6 262 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 NEK11Q8NG66 645 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 SPPL2BQ8TCT7 592 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 TFAP2BQ92481 460 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 SHC3Q92529 594 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 SMG7Q92540 1137 aaKnown RBP10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 HEXIM2Q96MH2 286 aaKnown RBP10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 ERGIC2Q96RQ1 377 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 ZSWIM1Q9BR11 485 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 NAA15Q9BXJ9 866 aaKnown RBP10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 S1PR5Q9H228 398 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 PLEKHA4Q9H4M7 779 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 CEP72Q9P209 647 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 THEGQ9P2T0 379 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 USP15Q9Y4E8 981 aaPredicted RBP10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 MYH10P35580 1976 aa10.41□□□□□ -0.74
TOPBP1-209ENST00000513818 FSD2A1L4K1 749 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 F8VP50 259 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 F8VZ95 297 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 TULP2O00295 520 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 FOXN3O00409 490 aaPredicted RBP10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 CYP26A1O43174 497 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 MBTPS2O43462 519 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 NCK2O43639 380 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 AP1G2O75843 785 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 BEST1O76090 585 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 CFHP08603 1231 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 FAM163BP0C2L3 166 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 GJA1P17302 382 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 GRIK1P39086 918 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 MAP3K7CLP57077 242 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 MAPRE1Q15691 268 aaKnown RBP10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 CFAP221Q4G0U5 840 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 GET4Q7L5D6 327 aaPredicted RBP10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 ENOSF1Q7L5Y1 443 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 GPRIN1Q7Z2K8 1008 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 TTC30AQ86WT1 665 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 CRYBG2Q8N1P7 616 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 C2orf15Q8WU43 125 aaKnown RBP10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 CYFIP2Q96F07 1278 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 FAXDC2Q96IV6 333 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 KCNK16Q96T55 309 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 PRKD2Q9BZL6 878 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 POMKQ9H5K3 350 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 PIDD1Q9HB75 910 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 ZNF334Q9HCZ1 680 aaPredicted RBP10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 PLCB1Q9NQ66 1216 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 ZDHHC7Q9NXF8 308 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 TSPAN16Q9UKR8 245 aa10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 MAGED2Q9UNF1 606 aaPredicted RBP10.4□□□□□ -0.74
TOPBP1-209ENST00000513818 ATP8B3O60423 1300 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 OBSL1O75147 1896 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 M0QYV0 167 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 O00370 1275 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 THAP12O43422 761 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 GFPT2O94808 682 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 MICAL2O94851 1124 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 FAM200BP0CF97 657 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 MYL4P12829 197 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 HOXB8P17481 243 aaPredicted RBP10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 TRIM21P19474 475 aaKnown RBP10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 GNA15P30679 374 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 PBX1P40424 430 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 ALDH1A3P47895 512 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 PSEN1P49768 467 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 JAM2P57087 298 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 USP46P62068 366 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 SMAD4Q13485 552 aaKnown RBP10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 SGO2Q562F6 1265 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 TAF3Q5VWG9 929 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 PTCRAQ6ISU1 281 aaPredicted RBP10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 ELMSAN1Q6PJG2 1045 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 CLEC20AQ6ZU45 233 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 GPR149Q86SP6 731 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 SLC47A2Q86VL8 602 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 PASD1Q8IV76 773 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 TTC39CQ8N584 583 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 ZMIZ2Q8NF64 920 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 ST13P5Q8NFI4 369 aaPredicted RBP10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 UBA3Q8TBC4 463 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 HDAC7Q8WUI4 952 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 ING5Q8WYH8 240 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 TCEAL4Q96EI5 215 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 SMARCD1Q96GM5 515 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 FUBP3Q96I24 572 aaKnown RBP eCLIP10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 SMOQ99835 787 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 CORO1BQ9BR76 489 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 ADAM7Q9H2U9 754 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 ABCB6Q9NP58 842 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 DNMT3BQ9UBC3 853 aaKnown RBP10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 DPP7Q9UHL4 492 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 COG5Q9UP83 839 aa10.39□□□□□ -0.75
TOPBP1-209ENST00000513818 NOTCH4Q99466 2003 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms