RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ARL14EPQ8N8R7 260 aaPredicted RBP11.79□□□□□ -0.52
DDX41-216ENST00000513562 IL17RCQ8NAC3 791 aa11.79□□□□□ -0.52
DDX41-216ENST00000513562 TXNDC5Q8NBS9 432 aaKnown RBP11.79□□□□□ -0.52
DDX41-216ENST00000513562 CEP76Q8TAP6 659 aa11.79□□□□□ -0.52
DDX41-216ENST00000513562 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
DDX41-216ENST00000513562 BBC3Q96PG8 261 aaPredicted RBP11.79□□□□□ -0.52
DDX41-216ENST00000513562 GTPBP2Q9BX10 602 aaKnown RBP11.79□□□□□ -0.52
DDX41-216ENST00000513562 ABCB6Q9NP58 842 aa11.79□□□□□ -0.52
DDX41-216ENST00000513562 KCND2Q9NZV8 630 aa11.79□□□□□ -0.52
DDX41-216ENST00000513562 CIZ1Q9ULV3 898 aaPredicted RBP11.79□□□□□ -0.52
DDX41-216ENST00000513562 ARHGAP26Q9UNA1 814 aa11.79□□□□□ -0.52
DDX41-216ENST00000513562 CITO14578 2027 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 C2orf78A6NCI8 922 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 SGK1O00141 431 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 SEC24BO95487 1268 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 KLF8O95600 359 aaPredicted RBP11.78□□□□□ -0.52
DDX41-216ENST00000513562 SERPINF2P08697 491 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 RPL10AP62906 217 aaKnown RBP11.78□□□□□ -0.52
DDX41-216ENST00000513562 TSPY1Q01534 308 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 ST3GAL1Q11201 340 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 BYSLQ13895 437 aaKnown RBP11.78□□□□□ -0.52
DDX41-216ENST00000513562 IL17AQ16552 155 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 DDR2Q16832 855 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 SFTPA1Q8IWL2 248 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 MINDY1Q8N5J2 469 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 SYT2Q8N9I0 419 aaPredicted RBP11.78□□□□□ -0.52
DDX41-216ENST00000513562 ADAMTS14Q8WXS8 1223 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 MSTO1Q9BUK6 570 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 ASB7Q9H672 318 aa11.78□□□□□ -0.52
DDX41-216ENST00000513562 CCDC86Q9H6F5 360 aaKnown RBP11.78□□□□□ -0.52
DDX41-216ENST00000513562 POLMQ9NP87 494 aaPredicted RBP11.78□□□□□ -0.52
DDX41-216ENST00000513562 DNAAF2Q9NVR5 837 aaKnown RBP11.78□□□□□ -0.52
DDX41-216ENST00000513562 BCCIPQ9P287 314 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDX41-216ENST00000513562 LARSQ9P2J5 1176 aaKnown RBP11.78□□□□□ -0.52
DDX41-216ENST00000513562 KIAA1549LQ6ZVL6 1849 aa11.77□□□□□ -0.52
DDX41-216ENST00000513562 KPNA7A9QM74 516 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 AP5Z1O43299 807 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 ADAM23O75077 832 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 ZIC2O95409 532 aaPredicted RBP11.77□□□□□ -0.53
DDX41-216ENST00000513562 CYP17A1P05093 508 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 SCP2P22307 547 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 CYP2F1P24903 491 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 SLC12A3P55017 1021 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 ANAPC15P60006 121 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 ZXDBP98169 803 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 MESP2Q0VG99 397 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 KCNB1Q14721 858 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 EOGTQ5NDL2 527 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 HYIQ5T013 277 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 SLC39A4Q6P5W5 647 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 CCNI2Q6ZMN8 369 aaPredicted RBP11.77□□□□□ -0.53
DDX41-216ENST00000513562 RABEPKQ7Z6M1 372 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 KIAA1958Q8N8K9 716 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 FSIP1Q8NA03 581 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 SPATA18Q8TC71 538 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 HMGB4Q8WW32 186 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 C8orf76Q96K31 380 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 PKMYT1Q99640 499 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 DPP3Q9NY33 737 aa11.77□□□□□ -0.53
DDX41-216ENST00000513562 NOL7Q9UMY1 257 aaKnown RBP11.77□□□□□ -0.53
DDX41-216ENST00000513562 A0A0A0MRY4 1105 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 NPHP3-ACAD11A0A0J9YXS1 232 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 TCRBV21S2A2A0A5A6 115 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 ARHGAP33O14559 1287 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 GJB3O75712 270 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 KAT7O95251 611 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 FTH1P19P0C7X4 201 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 HDCP19113 662 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 TIE1P35590 1138 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 EIF2DP41214 584 aaKnown RBP11.76□□□□□ -0.53
DDX41-216ENST00000513562 PRPHP41219 470 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 KIR2DL1P43626 348 aaPredicted RBP11.76□□□□□ -0.53
DDX41-216ENST00000513562 PDE6CP51160 858 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 RPL6Q02878 288 aaKnown RBP11.76□□□□□ -0.53
DDX41-216ENST00000513562 SLC14A1Q13336 389 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 TRIP6Q15654 476 aaKnown RBP11.76□□□□□ -0.53
DDX41-216ENST00000513562 SV2CQ496J9 727 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 CFAP221Q4G0U5 840 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 INTS6LQ5JSJ4 861 aaKnown RBP11.76□□□□□ -0.53
DDX41-216ENST00000513562 PDCL2Q8N4E4 241 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 KCTD17Q8N5Z5 321 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 OR2I1PQ8NGU4 316 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 ZNF560Q96MR9 790 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 CAMK1GQ96NX5 476 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 PNMA5Q96PV4 448 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 PNKPQ96T60 521 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 ACBD6Q9BR61 282 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 NUP205Q92621 2012 aa11.76□□□□□ -0.53
DDX41-216ENST00000513562 MYMKA6NI61 221 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 LEFTY2O00292 366 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 LAD1O00515 517 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 SH3BP5O60239 455 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 SYPP08247 313 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 PLA2G4BP0C869 781 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 PFKLP17858 780 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 SLC6A11P48066 632 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 ACOT2P49753 483 aa11.75□□□□□ -0.53
DDX41-216ENST00000513562 TOB1P50616 345 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms