RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 RPS9P46781 194 aaKnown RBP10.56□□□□□ -0.72
CCL28-203ENST00000513525 UBXN2BQ14CS0 331 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 WSCD1Q658N2 575 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 GAREM2Q75VX8 874 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 EPM2AIP1Q7L775 607 aaPredicted RBP10.56□□□□□ -0.72
CCL28-203ENST00000513525 DNAJB7Q7Z6W7 309 aaPredicted RBP10.56□□□□□ -0.72
CCL28-203ENST00000513525 FILIP1Q7Z7B0 1213 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 VSTM4Q8IW00 320 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 MFSD6LQ8IWD5 586 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 CLDN23Q96B33 292 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 MED15Q96RN5 788 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 C7orf25Q9BPX7 421 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 MKNK1Q9BUB5 465 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 BCO2Q9BYV7 579 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 BLZF1Q9H2G9 400 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 ZNF334Q9HCZ1 680 aaPredicted RBP10.56□□□□□ -0.72
CCL28-203ENST00000513525 HEBP1Q9NRV9 189 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 FRYLO94915 3013 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 ATG2BQ96BY7 2078 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 NCANO14594 1321 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 UBE4BO95155 1302 aa10.56□□□□□ -0.72
CCL28-203ENST00000513525 SPAG17Q6Q759 2223 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 GOLGA8IPA6NC78 632 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 GOLGA8JA6NMD2 632 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 MAN2B1O00754 1011 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 NCAM2O15394 837 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 RHOBTB3O94955 611 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 SP9P0CG40 484 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 CDK11BP21127 795 aaKnown RBP10.55□□□□□ -0.72
CCL28-203ENST00000513525 CD72P21854 359 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 TARSP26639 723 aaKnown RBP10.55□□□□□ -0.72
CCL28-203ENST00000513525 GABRR2P28476 465 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 CASP1P29466 404 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 WEE1P30291 646 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 MLLT6P55198 1093 aaPredicted RBP10.55□□□□□ -0.72
CCL28-203ENST00000513525 TFAMQ00059 246 aaKnown RBP10.55□□□□□ -0.72
CCL28-203ENST00000513525 EHHADHQ08426 723 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 FCHO2Q0JRZ9 810 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 PAK1Q13153 545 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 STIM1Q13586 685 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 GRM2Q14416 872 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 VEPH1Q14D04 833 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 SURF1Q15526 300 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 ZNF528Q3MIS6 628 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 CDKAL1Q5VV42 579 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 ZNF852Q6ZMS4 543 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 TMC6Q7Z403 805 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 LRRTM3Q86VH5 581 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 DCP1BQ8IZD4 617 aaKnown RBP10.55□□□□□ -0.72
CCL28-203ENST00000513525 TMEM86AQ8N2M4 240 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 GLIS3Q8NEA6 775 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 ZNF507Q8TCN5 953 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 PCIF1Q9H4Z3 704 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 SLITRK6Q9H5Y7 841 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 PDE11AQ9HCR9 933 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 KCND1Q9NSA2 647 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 GDAP2Q9NXN4 497 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 ZMYM5Q9UJ78 669 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 FBXO4Q9UKT5 387 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 L1RE1Q9UN81 338 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 AGAP1Q9UPQ3 857 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 MRPS17Q9Y2R5 130 aaKnown RBP10.55□□□□□ -0.72
CCL28-203ENST00000513525 MTF2Q9Y483 593 aaPredicted RBP10.55□□□□□ -0.72
CCL28-203ENST00000513525 EP300Q09472 2414 aaPredicted RBP10.55□□□□□ -0.72
CCL28-203ENST00000513525 EML5Q05BV3 1969 aa10.55□□□□□ -0.72
CCL28-203ENST00000513525 ZNF233A6NK53 670 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 FAM170BA6NMN3 283 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 HEPACAM2A8MVW5 462 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 ARNTLO00327 626 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 CHADO15335 359 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 HUS1O60921 280 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 SOAT2O75908 522 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 TMEM191BP0C7N4 346 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 HAPLN1P10915 354 aaPredicted RBP10.54□□□□□ -0.72
CCL28-203ENST00000513525 GDI1P31150 447 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 HOXD13P35453 343 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 VIPR2P41587 438 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 SNRPFP62306 86 aaKnown RBP10.54□□□□□ -0.72
CCL28-203ENST00000513525 ASIC1P78348 528 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 TSPY1Q01534 308 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 LRMPQ12912 555 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 FZD5Q13467 585 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 NFE2Q16621 373 aaPredicted RBP10.54□□□□□ -0.72
CCL28-203ENST00000513525 MGAT5BQ3V5L5 792 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 COBLL1Q53SF7 1204 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 FAM26FQ5R3K3 315 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 ZC3H14Q6PJT7 736 aaKnown RBP10.54□□□□□ -0.72
CCL28-203ENST00000513525 UNC13DQ70J99 1090 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 DPH6Q7L8W6 267 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 MAML2Q8IZL2 1156 aaPredicted RBP10.54□□□□□ -0.72
CCL28-203ENST00000513525 ADSSL1Q8N142 457 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 PDCL2Q8N4E4 241 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 CSGALNACT2Q8N6G5 542 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 CCDC112Q8NEF3 446 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 HPS3Q969F9 1004 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 MSANTD3Q96H12 275 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 ANKRD36BP1Q96IX9 119 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 SEPT5Q99719 369 aaPredicted RBP10.54□□□□□ -0.72
CCL28-203ENST00000513525 LPIN3Q9BQK8 851 aa10.54□□□□□ -0.72
CCL28-203ENST00000513525 ACBD6Q9BR61 282 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms