RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ADGRF2Q8IZF7 708 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 ARRDC1-AS1Q9H2J1 176 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 CUEDC2Q9H467 287 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 PANK4Q9NVE7 773 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 GCNT4Q9P109 453 aa13.46□□□□□ -0.25
VEGFA-216ENST00000512683 SLC9A3R1O14745 358 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-216ENST00000512683 NFATC1O95644 943 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 EGFP01133 1207 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 CKMP06732 381 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 KRT19P08727 400 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
VEGFA-216ENST00000512683 WARSP23381 471 aaKnown RBP13.45□□□□□ -0.26
VEGFA-216ENST00000512683 CASP5P51878 434 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 KCNB1Q14721 858 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 HSF5Q4G112 596 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-216ENST00000512683 TRIM68Q6AZZ1 485 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 CNNM4Q6P4Q7 775 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 CHFRQ96EP1 664 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 SAAL1Q96ER3 474 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 HPDLQ96IR7 371 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 FGFBP2Q9BYJ0 223 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 TNMDQ9H2S6 317 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 FBRSL1Q9HCM7 1045 aaKnown RBP13.45□□□□□ -0.26
VEGFA-216ENST00000512683 PDE11AQ9HCR9 933 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 TRPM5Q9NZQ8 1165 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 TBC1D7Q9P0N9 293 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 SIX4Q9UIU6 781 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 CACNA1BQ00975 2339 aa13.45□□□□□ -0.26
VEGFA-216ENST00000512683 TRIM66O15016 1216 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 SPTLC2O15270 562 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 GDF9O60383 454 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 PPP6R2O75170 966 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 TACC1O75410 805 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 TADA3O75528 432 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 ARSAP15289 507 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 GPR15P49685 360 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 SHC2P98077 582 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 USP4Q13107 963 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 STK38Q15208 465 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 E2F4Q16254 413 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 EML3Q32P44 896 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 PLK5Q496M5 336 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 PKN3Q6P5Z2 889 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 DENND5BQ6ZUT9 1274 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 KBTBD6Q86V97 674 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 WDR49Q8IV35 697 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 SCN4BQ8IWT1 228 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 PDILTQ8N807 584 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 ZSWIM2Q8NEG5 633 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 MYCBPAPQ8TBZ2 947 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 C8orf48Q96LL4 319 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 CYP2S1Q96SQ9 504 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 CBWD1Q9BRT8 395 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 TTLL2Q9BWV7 592 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 MTMR12Q9C0I1 747 aa13.44□□□□□ -0.26
VEGFA-216ENST00000512683 CGNQ9P2M7 1197 aaKnown RBP13.44□□□□□ -0.26
VEGFA-216ENST00000512683 A0A0A0MRY4 1105 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 EIF3DO15371 548 aaKnown RBP eCLIP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 YEATS4O95619 227 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 COL4A2P08572 1712 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 ACAT1P24752 427 aaKnown RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 ANXA13P27216 316 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 EIF2DP41214 584 aaKnown RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 WNT7BP56706 349 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 NOP14P78316 857 aaKnown RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 SLC7A9P82251 487 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 MRPS21P82921 87 aaKnown RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 PSMD2Q13200 908 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 PKP1Q13835 747 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 DMC1Q14565 340 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 USP39Q53GS9 565 aaKnown RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 STPG1Q5TH74 334 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 SDHAF4Q5VUM1 108 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 FOXD4L5Q5VV16 416 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 SHC4Q6S5L8 630 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 OSTM1Q86WC4 334 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 DDX42Q86XP3 938 aaKnown RBP eCLIP13.43□□□□□ -0.263e-10■■■■■ 30.6
VEGFA-216ENST00000512683 ADGRG2Q8IZP9 1017 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 ARL14EPQ8N8R7 260 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 ZNF507Q8TCN5 953 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 SH3RF2Q8TEC5 729 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 FOXD4L4Q8WXT5 416 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 ZNF396Q96N95 335 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 SYT15Q9BQS2 421 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 LSM14BQ9BX40 385 aaKnown RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 DUSP15Q9H1R2 295 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-216ENST00000512683 PCIF1Q9H4Z3 704 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 TRPC7Q9HCX4 862 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 KBTBD4Q9NVX7 518 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 ANGPTL2Q9UKU9 493 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 DENND4CQ5VZ89 1909 aa13.43□□□□□ -0.26
VEGFA-216ENST00000512683 GOLGA8IPA6NC78 632 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 ZNF840PA6NDX5 716 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 GOLGA8JA6NMD2 632 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 PRPF6O94906 941 aaKnown RBP13.42□□□□□ -0.26
VEGFA-216ENST00000512683 STAU1O95793 577 aaKnown RBP13.42□□□□□ -0.26
VEGFA-216ENST00000512683 ATICP31939 592 aa13.42□□□□□ -0.26
VEGFA-216ENST00000512683 GNL1P36915 607 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-216ENST00000512683 GRIK1P39086 918 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms