RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 STKLD1Q8NE28 680 aa13.52□□□□□ -0.25
DDX41-215ENST00000512431 SPATA18Q8TC71 538 aa13.52□□□□□ -0.25
DDX41-215ENST00000512431 HMGB4Q8WW32 186 aa13.52□□□□□ -0.25
DDX41-215ENST00000512431 MYRFLQ96LU7 910 aa13.52□□□□□ -0.25
DDX41-215ENST00000512431 SLC22A12Q96S37 553 aa13.52□□□□□ -0.25
DDX41-215ENST00000512431 DPP3Q9NY33 737 aa13.52□□□□□ -0.25
DDX41-215ENST00000512431 KCND2Q9NZV8 630 aa13.52□□□□□ -0.25
DDX41-215ENST00000512431 CPSF3Q9UKF6 684 aaKnown RBP13.52□□□□□ -0.25
DDX41-215ENST00000512431 PKD1L2Q7Z442 2459 aa13.52□□□□□ -0.25
DDX41-215ENST00000512431 ABCA7Q8IZY2 2146 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 A0A0B4J269 797 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 PP2D1A8MPX8 630 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 FAM189A1O60320 539 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 APODP05090 189 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 TCF3P15923 654 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 CDC25AP30304 524 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 NCKAP1LP55160 1127 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 FAM193AP78312 1265 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 TRIP6Q15654 476 aaKnown RBP13.51□□□□□ -0.25
DDX41-215ENST00000512431 PEAR1Q5VY43 1037 aaPredicted RBP13.51□□□□□ -0.25
DDX41-215ENST00000512431 DTHD1Q6ZMT9 781 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 KCNK18Q7Z418 384 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 KCTD17Q8N5Z5 321 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 FRMD1Q8N878 549 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 SYT2Q8N9I0 419 aaPredicted RBP13.51□□□□□ -0.25
DDX41-215ENST00000512431 LEO1Q8WVC0 666 aaPredicted RBP13.51□□□□□ -0.25
DDX41-215ENST00000512431 HNRNPLLQ8WVV9 542 aaKnown RBP13.51□□□□□ -0.25
DDX41-215ENST00000512431 PNKPQ96T60 521 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 CCSER1Q9C0I3 900 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 ABCB6Q9NP58 842 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 FSCN3Q9NQT6 498 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 TMLHEQ9NVH6 421 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 ARHGAP26Q9UNA1 814 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 C2CD2Q9Y426 696 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 ZNF638Q14966 1978 aaKnown RBP13.51□□□□□ -0.25
DDX41-215ENST00000512431 ADAMTS20P59510 1910 aa13.51□□□□□ -0.25
DDX41-215ENST00000512431 SGK1O00141 431 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 LAD1O00515 517 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 ARHGAP33O14559 1287 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 SLC9A3R1O14745 358 aaPredicted RBP13.5□□□□□ -0.25
DDX41-215ENST00000512431 ZBTB24O43167 697 aaPredicted RBP13.5□□□□□ -0.25
DDX41-215ENST00000512431 TADA3O75528 432 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 PIGRP01833 764 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 CYP2F1P24903 491 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 PNPLA4P41247 253 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 ANAPC15P60006 121 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 MYL7Q01449 175 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 RPL6Q02878 288 aaKnown RBP13.5□□□□□ -0.25
DDX41-215ENST00000512431 SLC14A1Q13336 389 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 MAP7D1Q3KQU3 841 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 IL17RCQ8NAC3 791 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 ADAMTS14Q8WXS8 1223 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 CDK5RAP3Q96JB5 506 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 ZNF560Q96MR9 790 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 ACBD6Q9BR61 282 aa13.5□□□□□ -0.25
DDX41-215ENST00000512431 APOBEC2Q9Y235 224 aaKnown RBP13.5□□□□□ -0.25
DDX41-215ENST00000512431 TCRBV21S2A2A0A5A6 115 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 C2orf78A6NCI8 922 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 K7ENM7 598 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 TULP1O00294 542 aaPredicted RBP13.49□□□□□ -0.25
DDX41-215ENST00000512431 KAT7O95251 611 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 CD59P13987 128 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 HNRNPLP14866 589 aaKnown RBP eCLIP13.49□□□□□ -0.25
DDX41-215ENST00000512431 PFKLP17858 780 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 ABCD1P33897 745 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 EIF2DP41214 584 aaKnown RBP13.49□□□□□ -0.25
DDX41-215ENST00000512431 ACOT2P49753 483 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 ZNF33AQ06730 810 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 NBR1Q14596 966 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 ZC2HC1CQ53FD0 456 aaPredicted RBP13.49□□□□□ -0.25
DDX41-215ENST00000512431 TRMT11Q7Z4G4 463 aaKnown RBP13.49□□□□□ -0.25
DDX41-215ENST00000512431 SPATA2LQ8IUW3 424 aaPredicted RBP13.49□□□□□ -0.25
DDX41-215ENST00000512431 SCN4BQ8IWT1 228 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 MYCT1Q8N699 235 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 SPRYD3Q8NCJ5 442 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 LRIG1Q96JA1 1093 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 CAPN10Q9HC96 672 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 DNAAF2Q9NVR5 837 aaKnown RBP13.49□□□□□ -0.25
DDX41-215ENST00000512431 DDX43Q9NXZ2 648 aaKnown RBP13.49□□□□□ -0.25
DDX41-215ENST00000512431 GCNT4Q9P109 453 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 ODF2LQ9ULJ1 636 aa13.49□□□□□ -0.25
DDX41-215ENST00000512431 ANTXRLA6NF34 631 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.48□□□□□ -0.25
DDX41-215ENST00000512431 LEFTY2O00292 366 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 SH3BP5O60239 455 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 HUS1O60921 280 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 ZIC2O95409 532 aaPredicted RBP13.48□□□□□ -0.25
DDX41-215ENST00000512431 FTH1P19P0C7X4 201 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 PLA2G4BP0C869 781 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 PRPHP41219 470 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 GRIA2P42262 883 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 TNFRSF4P43489 277 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 SLC6A11P48066 632 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 RESTQ13127 1097 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 DHCR24Q15392 516 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 PREPLQ4J6C6 727 aaPredicted RBP13.48□□□□□ -0.25
DDX41-215ENST00000512431 INTS6LQ5JSJ4 861 aaKnown RBP13.48□□□□□ -0.25
DDX41-215ENST00000512431 ADALQ6DHV7 355 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 SLFN12LQ6IEE8 588 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 CCNI2Q6ZMN8 369 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms