RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 TRIM49CP0CI26 452 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 LAG3P18627 525 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 CYP3A5P20815 502 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 PREPP48147 710 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 AP3M2P53677 418 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 SMAD3P84022 425 aaKnown RBP10.15□□□□□ -0.78
SNF8-211ENST00000512243 ORC1Q13415 861 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 DHX40Q8IX18 779 aaKnown RBP10.15□□□□□ -0.78
SNF8-211ENST00000512243 GSTCDQ8NEC7 633 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 ANKRD20A12PQ8NF67 263 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 PLEKHO2Q8TD55 490 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 PARD3BQ8TEW8 1205 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 C18orf25Q96B23 403 aaPredicted RBP10.15□□□□□ -0.78
SNF8-211ENST00000512243 UROC1Q96N76 676 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 TMEM175Q9BSA9 504 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 CXCL16Q9H2A7 254 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 NRDE2Q9H7Z3 1164 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 CBX8Q9HC52 389 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 INTS13Q9NVM9 706 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 STOML1Q9UBI4 398 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 TUBGCP4Q9UGJ1 667 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 R3HCC1Q9Y3T6 440 aaKnown RBP10.15□□□□□ -0.78
SNF8-211ENST00000512243 RWDD3Q9Y3V2 267 aa10.15□□□□□ -0.78
SNF8-211ENST00000512243 VWA8A3KMH1 1905 aa10.15□□□□□ -0.79
SNF8-211ENST00000512243 CHD9Q3L8U1 2897 aa10.15□□□□□ -0.79
SNF8-211ENST00000512243 CHD7Q9P2D1 2997 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 TSC2P49815 1807 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 PTPRJQ12913 1337 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 A0A1W2PP55 124 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 LCHNA4D1U4 455 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 KCNJ18B7U540 433 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 SART1O43290 800 aaKnown RBP10.14□□□□□ -0.79
SNF8-211ENST00000512243 N4BP1O75113 896 aaKnown RBP10.14□□□□□ -0.79
SNF8-211ENST00000512243 DDHD2O94830 711 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 CA3P07451 260 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 ESRRAP11474 423 aaPredicted RBP10.14□□□□□ -0.79
SNF8-211ENST00000512243 MYOGP15173 224 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 CTNNB1P35222 781 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 OR1G1P47890 313 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 MXI1P50539 228 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 GUCY2FP51841 1108 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 DSC1Q08554 894 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 BIRC3Q13489 604 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 KCNJ12Q14500 433 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 IQCB1Q15051 598 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 NAB2Q15742 525 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 HSP90AA4PQ58FG1 418 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 ZNF280BQ86YH2 543 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 GALNT12Q8IXK2 581 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 COLGALT2Q8IYK4 626 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 COLGALT1Q8NBJ5 622 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 BORCS6Q96GS4 357 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 ZNF560Q96MR9 790 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 ZNF558Q96NG5 402 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 SAMD11Q96NU1 681 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 NKX2-4Q9H2Z4 354 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 CWH43Q9H720 699 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 MMRN2Q9H8L6 949 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 GOLGA2P5Q9HBQ8 144 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 SAMSN1Q9NSI8 373 aaKnown RBP10.14□□□□□ -0.79
SNF8-211ENST00000512243 DPP3Q9NY33 737 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 ITGA11Q9UKX5 1188 aa10.14□□□□□ -0.79
SNF8-211ENST00000512243 YBX2Q9Y2T7 364 aaKnown RBP10.14□□□□□ -0.79
SNF8-211ENST00000512243 PRG3Q9Y2Y8 225 aaPredicted RBP10.14□□□□□ -0.79
SNF8-211ENST00000512243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNF8-211ENST00000512243 ATG2AQ2TAZ0 1938 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 LINC01553A4QN01 128 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 PES1O00541 588 aaKnown RBP10.13□□□□□ -0.79
SNF8-211ENST00000512243 PODXLO00592 558 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 B4GALT3O60512 393 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 CLSTN1O94985 981 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 KRT19P08727 400 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 CDK11BP21127 795 aaKnown RBP10.13□□□□□ -0.79
SNF8-211ENST00000512243 EEF1GP26641 437 aaKnown RBP10.13□□□□□ -0.79
SNF8-211ENST00000512243 LRPAP1P30533 357 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 POLR2BP30876 1174 aaKnown RBP10.13□□□□□ -0.79
SNF8-211ENST00000512243 GTF2H1P32780 548 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 RPL9P32969 192 aaKnown RBP10.13□□□□□ -0.79
SNF8-211ENST00000512243 PPM1AP35813 382 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 PIK3CAP42336 1068 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 SLC11A1P49279 550 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 ALDH7A1P49419 539 aaKnown RBP10.13□□□□□ -0.79
SNF8-211ENST00000512243 BCAR1P56945 870 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 DLG4P78352 724 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 MYL7Q01449 175 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 SOX4Q06945 474 aaPredicted RBP10.13□□□□□ -0.79
SNF8-211ENST00000512243 NCAPHQ15003 741 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 ZBTB6Q15916 424 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 MAN2A1Q16706 1144 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 UVSSAQ2YD98 709 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 LRIT3Q3SXY7 679 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 TCP11X2Q5H9J9 407 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 CDKAL1Q5VV42 579 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 KCNT2Q6UVM3 1135 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 LUZP1Q86V48 1076 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 IRF2BP1Q8IU81 584 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 TRIM59Q8IWR1 403 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 OR5B17Q8NGF7 314 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 TIFAQ96CG3 184 aa10.13□□□□□ -0.79
SNF8-211ENST00000512243 MYRFLQ96LU7 910 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms