RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 LRRC3CA6NJW4 275 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 MYO1FO00160 1098 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 QSOX1O00391 747 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 PROP1O75360 226 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 MATN4O95460 622 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 HDCP19113 662 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 TM4SF4P48230 202 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 PRIM2P49643 509 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 HNRNPMP52272 730 aaKnown RBP eCLIP3.92□□□□□ -1.78
CHD1-207ENST00000511628 CACNB3P54284 484 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 PDE1AP54750 535 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 GPSM2P81274 684 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 IQCB1Q15051 598 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 POLD3Q15054 466 aaPredicted RBP3.92□□□□□ -1.78
CHD1-207ENST00000511628 LONRF3Q496Y0 759 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 C10orf62Q5T681 223 aaPredicted RBP3.92□□□□□ -1.78
CHD1-207ENST00000511628 KIAA0895LQ68EN5 471 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 SUMO4Q6EEV6 95 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 SFRP4Q6FHJ7 346 aaPredicted RBP3.92□□□□□ -1.78
CHD1-207ENST00000511628 SRLQ86TD4 932 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 KRT78Q8N1N4 520 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 ANKS1AQ92625 1134 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 GJA10Q969M2 543 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 SLC46A1Q96NT5 459 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 POLR3GLQ9BT43 218 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 PCGF6Q9BYE7 350 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 AMBRA1Q9C0C7 1298 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 PRDM13Q9H4Q3 707 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 ETAA1Q9NY74 926 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 AGAP1Q9UPQ3 857 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 CORO2BQ9UQ03 480 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 ADGRA2Q96PE1 1338 aa3.92□□□□□ -1.78
CHD1-207ENST00000511628 F8W8V4 182 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 TBX3O15119 743 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 KPNA5O15131 536 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 PHGDHO43175 533 aaKnown RBP3.91□□□□□ -1.78
CHD1-207ENST00000511628 UNC5CO95185 931 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 GRPP07492 148 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 ATXN1LP0C7T5 689 aaKnown RBP3.91□□□□□ -1.78
CHD1-207ENST00000511628 HTR3AP46098 478 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 PXNP49023 591 aaPredicted RBP3.91□□□□□ -1.78
CHD1-207ENST00000511628 CASP5P51878 434 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 AK2P54819 239 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 SOX8P57073 446 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 SRSF4Q08170 494 aaKnown RBP3.91□□□□□ -1.78
CHD1-207ENST00000511628 ICE2Q659A1 982 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 PTF1AQ7RTS3 328 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 ZNF551Q7Z340 670 aaPredicted RBP3.91□□□□□ -1.78
CHD1-207ENST00000511628 SESTD1Q86VW0 696 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 CERS3Q8IU89 383 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 EXOC8Q8IYI6 725 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 SARAFQ96BY9 339 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 APIPQ96GX9 242 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 PSMD1Q99460 953 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 P2RX7Q99572 595 aaKnown RBP3.91□□□□□ -1.78
CHD1-207ENST00000511628 TIMP4Q99727 224 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 ARHGEF3Q9NR81 526 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 MRPS18AQ9NVS2 196 aaKnown RBP3.91□□□□□ -1.78
CHD1-207ENST00000511628 STK32BQ9NY57 414 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 ARPP21Q9UBL0 812 aaPredicted RBP3.91□□□□□ -1.78
CHD1-207ENST00000511628 CPNE7Q9UBL6 633 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 COMMD10Q9Y6G5 202 aa3.91□□□□□ -1.78
CHD1-207ENST00000511628 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.91□□□□□ -1.78
CHD1-207ENST00000511628 LOC102724159A0A0B4J2E5 919 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 A0A1W2PPL8 197 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 PPM1DO15297 605 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 FRS3O43559 492 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 NCK2O43639 380 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 TLR5O60602 858 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 FAM163BP0C2L3 166 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 PIM1P11309 404 aaPredicted RBP3.9□□□□□ -1.79
CHD1-207ENST00000511628 SLC7A1P30825 629 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 ABCG1P45844 678 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 LOXL3P58215 753 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 KRT17Q04695 432 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 OS9Q13438 667 aaPredicted RBP3.9□□□□□ -1.79
CHD1-207ENST00000511628 MORC3Q14149 939 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 PWP2Q15269 919 aaKnown RBP3.9□□□□□ -1.79
CHD1-207ENST00000511628 TMEM119Q4V9L6 283 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 ZNF618Q5T7W0 954 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 ARHGAP40Q5TG30 622 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 VPS53Q5VIR6 699 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 ZNF788Q6ZQV5 615 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 TOGARAM2Q6ZUX3 1019 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 SLC29A4Q7RTT9 530 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 LRRC71Q8N4P6 559 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 FANCBQ8NB91 859 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 FAM98AQ8NCA5 519 aaKnown RBP3.9□□□□□ -1.79
CHD1-207ENST00000511628 MORC4Q8TE76 937 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 MAML1Q92585 1016 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 PHKBQ93100 1093 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 SGCZQ96LD1 299 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 MYD88Q99836 296 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 SLC29A3Q9BZD2 475 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 NUP62CLQ9H1M0 184 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 PTPRHQ9HD43 1115 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 NLRC4Q9NPP4 1024 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 ZSCAN32Q9NX65 697 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 SH3BP4Q9P0V3 963 aa3.9□□□□□ -1.79
CHD1-207ENST00000511628 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms